Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN1O95832 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN1O95832 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN1O95832 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN1O95832 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN1O95832 AC093010.3-201ENST00000570269 15214 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN1O95832 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLDN1O95832 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 Y_RNA.89-201ENST00000363031 102 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU6-179P-201ENST00000363350 107 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU1-101P-201ENST00000391171 127 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 U3.42-201ENST00000408746 214 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN1O95832 AC114491.1-201ENST00000416095 246 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 MTND1P23-201ENST00000416931 372 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 USP9YP27-201ENST00000418455 438 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 YPEL5P1-201ENST00000419731 367 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN1O95832 SNRPEP10-201ENST00000420249 274 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AL109913.1-201ENST00000421173 514 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC012498.1-201ENST00000424037 437 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RPL7L1P10-201ENST00000427790 463 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 ELOCP14-201ENST00000428070 331 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RPL23AP22-201ENST00000437556 453 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 ELOCP7-201ENST00000439968 331 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RPS24P13-201ENST00000442520 397 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC073415.1-201ENST00000449240 153 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU7-182P-201ENST00000459009 62 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC233702.1-201ENST00000482905 502 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AL049874.1-201ENST00000489560 388 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU6-1281P-201ENST00000516223 105 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RN7SKP219-201ENST00000516825 296 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNU6-685P-201ENST00000517088 95 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 RNA5SP380-201ENST00000517190 98 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN1O95832 AC055876.1-202ENST00000567053 138 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN1O95832 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN1O95832 AC008752.3-201ENST00000588113 712 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDN1O95832 uc_338.1-201ENST00000612113 180 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AL110115.1-201ENST00000614396 364 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 uc_338.11-201ENST00000619132 160 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC025034.2-201ENST00000623264 286 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN1O95832 MTND5P42-201ENST00000637720 498 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN1O95832 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN1O95832 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN1O95832 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN1O95832 CKAP2P1-201ENST00000555477 2049 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 FAM35CP-201ENST00000554755 2470 ntBASIC2.73□□□□□ -1.97
CLDN1O95832 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN1O95832 AC090740.1-201ENST00000623193 2262 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLDN1O95832 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN1O95832 RNU6-451P-201ENST00000362921 107 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 RNY3P3-201ENST00000363816 102 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 SNORA62.1-201ENST00000364287 154 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 SNORD115-7-201ENST00000365306 82 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 SNORA69-201ENST00000383895 132 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN1O95832 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 RPL32P35-201ENST00000415214 394 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 RPL7P46-201ENST00000425129 740 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 RPL21P40-201ENST00000428586 483 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AL356867.1-201ENST00000429623 299 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 AL596276.1-201ENST00000434465 418 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 TAAR7P-201ENST00000436141 242 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 SEPT14P3-201ENST00000439401 183 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 CALM1P1-201ENST00000442082 433 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 NEFMP1-201ENST00000443423 1006 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AL732372.2-207ENST00000445840 183 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN1O95832 ELOCP23-201ENST00000452014 332 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 SEPT14P2-201ENST00000453405 183 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 AC108078.2-201ENST00000510750 236 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 SEPT14P4-201ENST00000513445 186 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 RN7SKP272-201ENST00000516988 232 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 RNU6-711P-201ENST00000517255 106 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 FO082796.1-201ENST00000523795 183 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN1O95832 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN1O95832 MIR4703-201ENST00000577728 79 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 DPPA3P3-201ENST00000603842 430 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC013553.2-201ENST00000604244 589 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC008536.2-201ENST00000607284 349 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 uc_338.25-201ENST00000613756 156 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC034102.8-201ENST00000615146 484 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.72□□□□□ -1.97
CLDN1O95832 AC068831.7-201ENST00000616954 363 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms