Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC073614.1-201ENST00000438690 650 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.72□□□□□ -2.29
POLR1AO95602 RNU5F-8P-201ENST00000515941 111 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 SNORA48.10-201ENST00000516965 160 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 SCARNA11.3-201ENST00000517276 130 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.72□□□□□ -2.29
POLR1AO95602 AC011260.1-201ENST00000578420 472 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 MIR4514-201ENST00000581410 57 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 BNIP3P25-201ENST00000596023 559 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AC025588.2-201ENST00000604851 466 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 RNU6-156P-201ENST00000621869 107 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 SNORA40.19-201ENST00000390846 128 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.71□□□□□ -2.3
POLR1AO95602 PTENP1-201ENST00000447117 1215 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 AC114786.4-201ENST00000508771 728 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 AC114797.1-201ENST00000514003 728 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 SNORA44.1-201ENST00000517031 108 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.71□□□□□ -2.3
POLR1AO95602 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.71□□□□□ -2.3
POLR1AO95602 AC074051.3-201ENST00000570238 358 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 AL590410.1-201ENST00000617925 333 ntBASIC0.71□□□□□ -2.3
POLR1AO95602 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
POLR1AO95602 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
POLR1AO95602 RNU6-1164P-201ENST00000364428 107 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 RNU6-185P-201ENST00000384421 107 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 Y_RNA.518-201ENST00000384552 113 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 RNA5SP299-201ENST00000391203 116 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
POLR1AO95602 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 AC019070.1-201ENST00000415008 1024 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.7□□□□□ -2.3
POLR1AO95602 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.7□□□□□ -2.3
POLR1AO95602 AL590365.1-201ENST00000450788 243 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 RNU7-23P-201ENST00000459465 62 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.7□□□□□ -2.3
POLR1AO95602 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.7□□□□□ -2.3
POLR1AO95602 AP002826.1-201ENST00000608835 315 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 AC087821.2-201ENST00000637086 450 ntBASIC0.7□□□□□ -2.3
POLR1AO95602 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
POLR1AO95602 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.69□□□□□ -2.3
POLR1AO95602 RNA5SP125-201ENST00000364843 120 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 PIGPP2-201ENST00000411569 458 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.69□□□□□ -2.3
POLR1AO95602 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.69□□□□□ -2.3
POLR1AO95602 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.69□□□□□ -2.3
POLR1AO95602 AC090888.1-201ENST00000561335 1141 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
POLR1AO95602 RNU4-67P-201ENST00000364569 141 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 MT-TC-201ENST00000387405 66 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.69□□□□□ -2.3
POLR1AO95602 UBE2V2P3-201ENST00000433562 437 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.69□□□□□ -2.3
POLR1AO95602 RNU6-1282P-201ENST00000516735 96 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.69□□□□□ -2.3
POLR1AO95602 RMST_5.1-201ENST00000618704 126 ntBASIC0.69□□□□□ -2.3
POLR1AO95602 RNU4-23P-201ENST00000362839 140 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 RNU6-1243P-201ENST00000364028 107 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 RNA5SP56-201ENST00000410277 118 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.68□□□□□ -2.3
POLR1AO95602 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.68□□□□□ -2.3
POLR1AO95602 RNF138P1-201ENST00000502765 546 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AC016065.2-201ENST00000514530 444 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 RNU6-319P-201ENST00000516025 108 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AC025857.1-201ENST00000525252 377 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.68□□□□□ -2.3
POLR1AO95602 MTCYBP27-201ENST00000555160 670 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AL133241.1-201ENST00000556832 487 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AC022254.1-201ENST00000567857 235 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AC087045.1-201ENST00000605856 382 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 AP003400.5-201ENST00000624827 617 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 MIR5087-201ENST00000635826 76 ntBASIC0.68□□□□□ -2.3
POLR1AO95602 RNU6-1251P-201ENST00000364502 107 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 RNU6-1074P-201ENST00000383995 104 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 HMGN2P39-201ENST00000398005 273 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.67□□□□□ -2.3
POLR1AO95602 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.67□□□□□ -2.3
POLR1AO95602 AC092573.2-201ENST00000434546 243 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.67□□□□□ -2.3
POLR1AO95602 AF213884.2-201ENST00000510417 903 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.67□□□□□ -2.3
POLR1AO95602 HMGB1P14-201ENST00000557424 591 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 HMGN1P30-201ENST00000589286 268 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 ZNF92P3-201ENST00000596594 954 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 FRG1HP-204ENST00000617940 757 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AC091925.2-201ENST00000625059 256 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 RNU6-288P-201ENST00000363690 104 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 MIR1912-201ENST00000410389 80 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AC004854.1-201ENST00000440356 349 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.67□□□□□ -2.3
POLR1AO95602 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.67□□□□□ -2.3
POLR1AO95602 AC079791.1-201ENST00000605356 973 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.67□□□□□ -2.3
POLR1AO95602 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.67□□□□□ -2.3
POLR1AO95602 AC097372.4-201ENST00000625025 466 ntBASIC0.67□□□□□ -2.3
POLR1AO95602 AP000776.1-201ENST00000530032 1663 ntBASIC0.66□□□□□ -2.3
POLR1AO95602 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.66□□□□□ -2.3
POLR1AO95602 SNORD65-201ENST00000391079 73 ntBASIC0.66□□□□□ -2.3
POLR1AO95602 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms