Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPL23AP82-202ENST00000427528 469 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 RPL7P12-201ENST00000446719 750 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 RPL23AP31-201ENST00000456160 467 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 snoU13.26-201ENST00000459452 105 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AC007547.1-201ENST00000462177 490 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 CENPBD1P1-201ENST00000464061 469 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 TRBV1-201ENST00000476502 284 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AC092451.1-201ENST00000480211 153 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 SNRPGP16-201ENST00000533275 226 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 RAB11AP2-201ENST00000545905 639 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL121576.1-201ENST00000556055 276 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL117336.2-201ENST00000602435 335 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AC007687.1-201ENST00000602704 304 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AC004832.5-201ENST00000608677 401 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL355810.1-201ENST00000614629 552 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 AL359547.2-201ENST00000615810 418 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 NCAPGP1-201ENST00000505112 1814 ntBASIC4.55□□□□□ -1.68
RAPGEF3O95398 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.55□□□□□ -1.68
RAPGEF3O95398 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAPGEF3O95398 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAPGEF3O95398 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAPGEF3O95398 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAPGEF3O95398 Y_RNA.142-201ENST00000363491 102 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 RNU6-190P-201ENST00000384154 102 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 RNU6-550P-201ENST00000391057 101 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL360182.1-201ENST00000397433 468 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL592114.1-201ENST00000403842 483 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 RN7SKP32-201ENST00000410167 303 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL451054.2-201ENST00000420896 202 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 CST9LP2-201ENST00000437612 320 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 MRPS31P2-201ENST00000451581 518 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 FABP5P13-201ENST00000452144 328 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 RPS26P15-201ENST00000488067 348 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC025445.1-201ENST00000502728 300 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 RNU6-1073P-201ENST00000517182 106 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 OR5D17P-201ENST00000531492 978 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC243972.3-201ENST00000539655 198 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 PSMA3P-201ENST00000555485 635 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL138889.2-201ENST00000603883 242 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL390240.1-201ENST00000612950 384 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC093913.1-201ENST00000614178 329 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AL136221.1-201ENST00000621449 509 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 AC090617.10-201ENST00000624308 134 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 MTND5P42-201ENST00000637720 498 ntBASIC4.54□□□□□ -1.68
RAPGEF3O95398 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAPGEF3O95398 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAPGEF3O95398 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RAPGEF3O95398 RNU6-600P-201ENST00000362524 99 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 Y_RNA.61-201ENST00000362835 102 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.53□□□□□ -1.68
RAPGEF3O95398 SNORA67.4-201ENST00000384688 142 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 MIR196B-201ENST00000384852 84 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 MIR34A-201ENST00000385130 110 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 MIR1290-201ENST00000408735 78 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 RN7SKP140-201ENST00000411196 284 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 RNU2-71P-201ENST00000411395 189 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 AL513331.1-201ENST00000411908 397 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 MTND4P28-201ENST00000426217 387 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 HMGB1P27-201ENST00000431429 603 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.53□□□□□ -1.68
RAPGEF3O95398 AL513328.1-201ENST00000446460 224 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 MIR2276-201ENST00000516886 89 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 RNU6-1314P-201ENST00000517139 104 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 IGKV2D-23-201ENST00000518179 286 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 AC022690.1-201ENST00000526681 550 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 AC005951.2-201ENST00000576282 495 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 MIR4719-201ENST00000585233 84 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 VN1R80P-201ENST00000597126 338 ntBASIC4.53□□□□□ -1.68
RAPGEF3O95398 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RAPGEF3O95398 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.53□□□□□ -1.68
RAPGEF3O95398 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAPGEF3O95398 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RAPGEF3O95398 AP001486.2-201ENST00000561652 5113 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 RNU6-82P-201ENST00000363970 107 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 RNU6-14P-201ENST00000384630 106 ntBASIC4.52□□□□□ -1.69
RAPGEF3O95398 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAPGEF3O95398 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.52□□□□□ -1.69
RAPGEF3O95398 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms