Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR3605-201ENST00000583214 100 ntBASIC3.25□□□□□ -1.89
MBD4O95243 PIGPP4-201ENST00000584447 307 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AL022154.1-201ENST00000604698 785 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AL158032.1-201ENST00000605401 106 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AL121992.2-201ENST00000606262 256 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AC025034.2-201ENST00000623264 286 ntBASIC3.25□□□□□ -1.89
MBD4O95243 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD4O95243 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.25□□□□□ -1.89
MBD4O95243 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD4O95243 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MBD4O95243 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MBD4O95243 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD4O95243 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD4O95243 MTND5P17-201ENST00000418405 1603 ntBASIC3.24□□□□□ -1.89
MBD4O95243 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD4O95243 RN7SKP226-201ENST00000364912 300 ntBASIC3.24□□□□□ -1.89
MBD4O95243 RNU6-61P-201ENST00000365528 109 ntBASIC3.24□□□□□ -1.89
MBD4O95243 SNORD116-1-201ENST00000384335 95 ntBASIC3.24□□□□□ -1.89
MBD4O95243 MIR34A-201ENST00000385130 110 ntBASIC3.24□□□□□ -1.89
MBD4O95243 MIR181B1-201ENST00000385240 110 ntBASIC3.24□□□□□ -1.89
MBD4O95243 SNORA40C-201ENST00000391285 128 ntBASIC3.24□□□□□ -1.89
MBD4O95243 MIR887-201ENST00000401258 79 ntBASIC3.24□□□□□ -1.89
MBD4O95243 RNA5SP184-201ENST00000411071 108 ntBASIC3.24□□□□□ -1.89
MBD4O95243 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MBD4O95243 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD4O95243 BX295541.1-201ENST00000417774 250 ntBASIC3.24□□□□□ -1.89
MBD4O95243 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD4O95243 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
MBD4O95243 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.24□□□□□ -1.89
MBD4O95243 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD4O95243 RN7SL499P-201ENST00000481141 276 ntBASIC3.24□□□□□ -1.89
MBD4O95243 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MBD4O95243 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.24□□□□□ -1.89
MBD4O95243 AC022447.1-201ENST00000515358 464 ntBASIC3.24□□□□□ -1.89
MBD4O95243 RNU6-123P-201ENST00000516163 102 ntBASIC3.24□□□□□ -1.89
MBD4O95243 RNU6-56P-201ENST00000516986 93 ntBASIC3.24□□□□□ -1.89
MBD4O95243 SNORA31.19-201ENST00000517079 126 ntBASIC3.24□□□□□ -1.89
MBD4O95243 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.24□□□□□ -1.89
MBD4O95243 AC026241.1-201ENST00000517873 2142 ntBASIC3.24□□□□□ -1.89
MBD4O95243 AP001646.1-201ENST00000527936 915 ntBASIC3.24□□□□□ -1.89
MBD4O95243 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD4O95243 AC012213.3-201ENST00000577199 777 ntBASIC3.24□□□□□ -1.89
MBD4O95243 AC119751.7-201ENST00000600494 245 ntBASIC3.24□□□□□ -1.89
MBD4O95243 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.24□□□□□ -1.89
MBD4O95243 AC010678.1-201ENST00000614118 713 ntBASIC3.24□□□□□ -1.89
MBD4O95243 AC024940.5-201ENST00000622889 474 ntBASIC3.24□□□□□ -1.89
MBD4O95243 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
MBD4O95243 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MBD4O95243 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD4O95243 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD4O95243 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MBD4O95243 RNU6-859P-201ENST00000362728 107 ntBASIC3.23□□□□□ -1.89
MBD4O95243 SNORA68.1-201ENST00000364537 132 ntBASIC3.23□□□□□ -1.89
MBD4O95243 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MBD4O95243 SNORA75-201ENST00000384158 137 ntBASIC3.23□□□□□ -1.89
MBD4O95243 RNU6-348P-201ENST00000384386 107 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD4O95243 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD4O95243 MTCO2P34-201ENST00000421994 607 ntBASIC3.23□□□□□ -1.89
MBD4O95243 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.23□□□□□ -1.89
MBD4O95243 AC063976.3-201ENST00000426849 329 ntBASIC3.23□□□□□ -1.89
MBD4O95243 CALM2P2-201ENST00000428512 440 ntBASIC3.23□□□□□ -1.89
MBD4O95243 ARL5AP4-201ENST00000430731 512 ntBASIC3.23□□□□□ -1.89
MBD4O95243 MTATP6P16-201ENST00000434543 526 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AL078601.1-201ENST00000444542 271 ntBASIC3.23□□□□□ -1.89
MBD4O95243 MTATP6P26-201ENST00000445926 662 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AL360221.1-201ENST00000445989 335 ntBASIC3.23□□□□□ -1.89
MBD4O95243 MTCYBP1-201ENST00000454315 1119 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.23□□□□□ -1.89
MBD4O95243 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.23□□□□□ -1.89
MBD4O95243 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.23□□□□□ -1.89
MBD4O95243 SCARNA11.3-201ENST00000517276 130 ntBASIC3.23□□□□□ -1.89
MBD4O95243 MTCO2P4-201ENST00000517968 247 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.23□□□□□ -1.89
MBD4O95243 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD4O95243 RANP3-201ENST00000530970 276 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD4O95243 MIR4528-201ENST00000577763 90 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD4O95243 AC006566.1-201ENST00000608943 513 ntBASIC3.23□□□□□ -1.89
MBD4O95243 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AC005332.10-201ENST00000612725 619 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AL157786.1-207ENST00000627771 695 ntBASIC3.23□□□□□ -1.89
MBD4O95243 AC090582.1-201ENST00000636321 199 ntBASIC3.23□□□□□ -1.89
MBD4O95243 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.23□□□□□ -1.89
MBD4O95243 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.22□□□□□ -1.89
MBD4O95243 AL390237.1-201ENST00000404226 1415 ntBASIC3.22□□□□□ -1.89
MBD4O95243 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
MBD4O95243 Y_RNA.367-201ENST00000365544 101 ntBASIC3.22□□□□□ -1.89
MBD4O95243 CISD1P1-201ENST00000393907 327 ntBASIC3.22□□□□□ -1.89
MBD4O95243 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD4O95243 AL160275.3-201ENST00000423876 471 ntBASIC3.22□□□□□ -1.89
MBD4O95243 AC007560.1-201ENST00000426912 237 ntBASIC3.22□□□□□ -1.89
MBD4O95243 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD4O95243 AL031667.1-201ENST00000440222 725 ntBASIC3.22□□□□□ -1.89
MBD4O95243 MTCO1P19-201ENST00000443487 500 ntBASIC3.22□□□□□ -1.89
MBD4O95243 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD4O95243 AC022364.2-201ENST00000457963 554 ntBASIC3.22□□□□□ -1.89
MBD4O95243 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.22□□□□□ -1.89
MBD4O95243 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms