Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.93
NKX2-2O95096 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NKX2-2O95096 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX2-2O95096 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX2-2O95096 SNORD3E-201ENST00000362899 217 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 RNY3P3-201ENST00000363816 102 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 Z98749.2-208ENST00000381646 500 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 CD24P4-201ENST00000382840 243 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 RNU6-45P-201ENST00000384471 107 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 SNORA48.7-201ENST00000391302 135 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AL357075.1-201ENST00000404107 726 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AL606923.1-201ENST00000406616 190 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 RPL5P18-201ENST00000406671 891 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 Y_RNA.623-201ENST00000411128 95 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AC023141.4-201ENST00000412031 328 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AC007560.1-201ENST00000426912 237 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 GTF2IP20-201ENST00000431663 360 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-2O95096 HMGN2P10-201ENST00000448085 265 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 RPS15AP27-201ENST00000449183 343 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 SCARNA18-201ENST00000459004 134 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.96□□□□□ -1.94
NKX2-2O95096 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.96□□□□□ -1.94
NKX2-2O95096 RNA5SP401-201ENST00000515920 127 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 RNU4-29P-201ENST00000515943 174 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.96□□□□□ -1.94
NKX2-2O95096 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-2O95096 LRRC37A5P-203ENST00000580181 585 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.96□□□□□ -1.94
NKX2-2O95096 AC073539.2-201ENST00000597113 165 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 AL591516.1-201ENST00000611326 274 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 RMST_4.1-201ENST00000616886 107 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 uc_338.34-201ENST00000617467 174 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 MIR3688-2-201ENST00000636963 87 ntBASIC2.96□□□□□ -1.94
NKX2-2O95096 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NKX2-2O95096 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
NKX2-2O95096 ASNSP3-201ENST00000451989 1306 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-2O95096 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-2O95096 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NKX2-2O95096 RNA5SP139-201ENST00000364340 117 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 SNORD14B-201ENST00000364533 90 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX2-2O95096 Y_RNA.399-201ENST00000383955 105 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 RNU6-393P-201ENST00000384475 107 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 RNU6-1179P-201ENST00000384667 107 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 MIR670-201ENST00000390142 98 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 SNORA16.2-201ENST00000390991 127 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 SNORD115-47-201ENST00000391226 86 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-2O95096 AL592114.1-201ENST00000403842 483 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 RNU6-607P-201ENST00000411283 108 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AL592148.1-201ENST00000413568 445 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC009237.5-201ENST00000414271 501 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC005300.1-201ENST00000428401 373 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 YME1L1P1-201ENST00000429435 297 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AL627311.1-201ENST00000431514 115 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 RPS15AP5-201ENST00000436276 388 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-2O95096 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 Z75741.1-201ENST00000446793 314 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AL583843.1-201ENST00000456070 346 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 HMGB1P30-201ENST00000492455 606 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-2O95096 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-2O95096 SNORD60.2-201ENST00000516883 86 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 MTND4P7-201ENST00000523876 130 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-2O95096 MIR5583-1-201ENST00000580941 59 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.95□□□□□ -1.94
NKX2-2O95096 AL645944.1-201ENST00000603857 493 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 U6atac.1-201ENST00000616025 117 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 AC022418.1-201ENST00000624118 445 ntBASIC2.95□□□□□ -1.94
NKX2-2O95096 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-2O95096 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NKX2-2O95096 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
NKX2-2O95096 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NKX2-2O95096 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RNU6-451P-201ENST00000362921 107 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RNU1-105P-201ENST00000363470 161 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RNA5SP267-201ENST00000364893 126 ntBASIC2.94□□□□□ -1.94
NKX2-2O95096 RNU6-1027P-201ENST00000383998 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms