Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC025165.5-201ENST00000602802 578 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC130324.3-201ENST00000614165 542 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC021755.4-201ENST00000616620 456 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC138627.2-201ENST00000624202 601 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 AC103710.2-202ENST00000641454 2853 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.7□□□□□ -2.14
UPK1BO75841 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
UPK1BO75841 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 RNA5SP276-201ENST00000362580 94 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
UPK1BO75841 RNU6-1032P-201ENST00000384100 107 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 RNU6-83P-201ENST00000384568 112 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 SNORA44-201ENST00000384584 132 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 MIR518D-201ENST00000385014 87 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.69□□□□□ -2.14
UPK1BO75841 AL353621.1-201ENST00000418219 243 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1BO75841 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1BO75841 RNU6-953P-201ENST00000459154 107 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 S100A11P2-201ENST00000467589 312 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UPK1BO75841 RN7SL432P-201ENST00000484057 298 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC107032.1-201ENST00000485945 480 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 RPS3AP22-201ENST00000488297 769 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.69□□□□□ -2.14
UPK1BO75841 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1BO75841 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.69□□□□□ -2.14
UPK1BO75841 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UPK1BO75841 DUXAP1-201ENST00000556632 463 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC233702.2-202ENST00000562547 291 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC025678.1-201ENST00000567861 338 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1BO75841 MIR3944-201ENST00000581277 108 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 MIR4307-201ENST00000582802 84 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1BO75841 AC013244.3-201ENST00000605614 388 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AP001486.3-201ENST00000615334 372 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 AL607023.1-201ENST00000620045 248 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1BO75841 AL162373.1-201ENST00000620433 407 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.69□□□□□ -2.14
UPK1BO75841 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.69□□□□□ -2.14
UPK1BO75841 RNU6-157P-201ENST00000383957 107 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 MIR1302-8-201ENST00000408342 128 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 RPS20P15-201ENST00000412792 311 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 MTCO2P23-201ENST00000425216 680 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 AL591212.2-201ENST00000433923 257 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL161788.1-201ENST00000441805 169 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 FABP5P13-201ENST00000452144 328 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK1BO75841 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 AL139824.2-201ENST00000458731 1095 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.68□□□□□ -2.14
UPK1BO75841 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 AC018437.1-201ENST00000492214 406 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 MTND4P2-201ENST00000507767 1203 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK1BO75841 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK1BO75841 RN7SKP132-201ENST00000516001 208 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AC105185.1-201ENST00000518705 535 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 AC107953.1-201ENST00000522216 297 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 MTATP6P15-201ENST00000527233 835 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK1BO75841 MIR5089-201ENST00000580047 84 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK1BO75841 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 MIR5195-201ENST00000583555 115 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK1BO75841 BNIP3P40-201ENST00000596017 556 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL713866.2-201ENST00000603579 219 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL670379.10-201ENST00000604330 253 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL670379.9-201ENST00000605428 253 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AC022893.3-201ENST00000607665 437 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AC009974.1-201ENST00000608881 455 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 MTND5P42-201ENST00000637720 498 ntBASIC1.68□□□□□ -2.14
UPK1BO75841 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK1BO75841 AC092104.1-201ENST00000497346 1441 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 RNU6-166P-201ENST00000384371 107 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 Y_RNA.534-201ENST00000384599 112 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 RNA5SP171-201ENST00000391071 115 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 RPS20P2-201ENST00000402520 389 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 AL591034.2-201ENST00000402839 359 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 FTH1P15-201ENST00000406984 280 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 RNU6-1025P-201ENST00000410629 104 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 AL139156.1-201ENST00000412785 841 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 MTCO2P21-201ENST00000419780 677 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
UPK1BO75841 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK1BO75841 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms