Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.03□□□□□ -2.08
NPHP4O75161 AL158801.5-201ENST00000623123 465 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.03□□□□□ -2.08
NPHP4O75161 AL079343.1-201ENST00000572358 1771 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 AL138713.1-201ENST00000624026 2130 ntBASIC2.03□□□□□ -2.08
NPHP4O75161 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.09
NPHP4O75161 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPHP4O75161 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 RNU6-884P-201ENST00000363889 107 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 SNORA68.1-201ENST00000364537 132 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AL356421.1-201ENST00000403255 413 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AL513475.1-201ENST00000406602 315 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AC023141.4-201ENST00000412031 328 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 TIMM9P2-201ENST00000419324 266 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.02□□□□□ -2.09
NPHP4O75161 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.02□□□□□ -2.09
NPHP4O75161 RBM43P1-201ENST00000476891 1081 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.02□□□□□ -2.09
NPHP4O75161 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPHP4O75161 AC105252.1-201ENST00000503089 286 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AC113347.3-201ENST00000509113 148 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.02□□□□□ -2.09
NPHP4O75161 DEFB131D-201ENST00000526803 184 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPHP4O75161 AC024614.2-201ENST00000577584 372 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.02□□□□□ -2.09
NPHP4O75161 AC006270.3-201ENST00000605967 1036 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 AC019226.1-201ENST00000625666 515 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 MTND1P37-201ENST00000636562 264 ntBASIC2.02□□□□□ -2.09
NPHP4O75161 CDC27P3-201ENST00000635418 1910 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NPHP4O75161 RNU6-777P-201ENST00000364265 104 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 RNU6-741P-201ENST00000383889 107 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 SNORD116-12-201ENST00000384468 92 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 RNU6-1328P-201ENST00000410938 106 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 POLR2J4-204ENST00000418424 324 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 ZNF863P-201ENST00000426746 417 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 CALM1P1-201ENST00000442082 433 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 COX6CP14-201ENST00000469580 174 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 AC107626.1-201ENST00000471084 183 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 AC022493.1-201ENST00000492984 337 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 AC114786.4-201ENST00000508771 728 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.01□□□□□ -2.09
NPHP4O75161 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.01□□□□□ -2.09
NPHP4O75161 AC114797.1-201ENST00000514003 728 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.01□□□□□ -2.09
NPHP4O75161 CYCSP2-201ENST00000558168 301 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 FTX_3.1-201ENST00000610451 147 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 AC104763.3-201ENST00000613765 618 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 AL138960.2-201ENST00000625145 535 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 CCT4P2-201ENST00000233836 1548 ntBASIC2.01□□□□□ -2.09
NPHP4O75161 SNORD114-27-201ENST00000363766 70 ntBASIC2□□□□□ -2.09
NPHP4O75161 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2□□□□□ -2.09
NPHP4O75161 RNU6-516P-201ENST00000411381 104 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL445669.1-201ENST00000426743 755 ntBASIC2□□□□□ -2.09
NPHP4O75161 NANOGP2-201ENST00000435391 727 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2□□□□□ -2.09
NPHP4O75161 COX7BP2-201ENST00000437976 242 ntBASIC2□□□□□ -2.09
NPHP4O75161 IPO7P1-201ENST00000442031 636 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 EEF1E1P1-201ENST00000446998 430 ntBASIC2□□□□□ -2.09
NPHP4O75161 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 AC004223.1-201ENST00000479840 271 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC021382.1-201ENST00000483523 359 ntBASIC2□□□□□ -2.09
NPHP4O75161 MRPL42P6-201ENST00000486397 371 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC104629.1-201ENST00000494226 508 ntBASIC2□□□□□ -2.09
NPHP4O75161 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2□□□□□ -2.09
NPHP4O75161 AC118942.1-201ENST00000529674 1035 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC084364.2-201ENST00000546924 395 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2□□□□□ -2.09
NPHP4O75161 AC002545.1-201ENST00000592511 181 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC097468.3-201ENST00000607956 456 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC068944.2-201ENST00000610373 403 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC010133.1-201ENST00000615809 842 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2□□□□□ -2.09
NPHP4O75161 AC098614.2-201ENST00000426040 255 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2□□□□□ -2.09
NPHP4O75161 MEMO1P3-201ENST00000459811 302 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC104982.1-201ENST00000478775 574 ntBASIC2□□□□□ -2.09
NPHP4O75161 RPS3AP22-201ENST00000488297 769 ntBASIC2□□□□□ -2.09
NPHP4O75161 RN7SKP49-201ENST00000516675 260 ntBASIC2□□□□□ -2.09
NPHP4O75161 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC091163.3-201ENST00000518269 1144 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2□□□□□ -2.09
NPHP4O75161 AL353997.4-201ENST00000586196 166 ntBASIC2□□□□□ -2.09
NPHP4O75161 AL161729.4-201ENST00000604650 476 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC131235.4-201ENST00000609288 620 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC008498.1-201ENST00000613012 531 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC083806.3-201ENST00000614016 455 ntBASIC2□□□□□ -2.09
NPHP4O75161 AC106858.1-201ENST00000637497 429 ntBASIC2□□□□□ -2.09
NPHP4O75161 LINC02211-204ENST00000642024 1070 ntBASIC2□□□□□ -2.09
NPHP4O75161 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
NPHP4O75161 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NPHP4O75161 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms