Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AP000769.2-201ENST00000602344 396 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AC069294.1-201ENST00000608397 350 ntBASIC5.54□□□□□ -1.52
RNF40O75150 MIR6820-201ENST00000611508 62 ntBASIC5.54□□□□□ -1.52
RNF40O75150 BX005214.3-202ENST00000619809 325 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AP001340.1-201ENST00000624405 217 ntBASIC5.54□□□□□ -1.52
RNF40O75150 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RNF40O75150 SRP72P2-201ENST00000344851 1979 ntBASIC5.54□□□□□ -1.52
RNF40O75150 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RNF40O75150 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF40O75150 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF40O75150 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF40O75150 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF40O75150 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF40O75150 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF40O75150 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF40O75150 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RNF40O75150 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF40O75150 AL138820.1-201ENST00000617901 5305 ntBASIC5.53□□□□□ -1.52
RNF40O75150 AC083843.2-201ENST00000568248 6253 ntBASIC5.53□□□□□ -1.52
RNF40O75150 RNU6-199P-201ENST00000362954 107 ntBASIC5.53□□□□□ -1.52
RNF40O75150 U3.19-201ENST00000390893 196 ntBASIC5.53□□□□□ -1.52
RNF40O75150 MIR888-201ENST00000401186 77 ntBASIC5.53□□□□□ -1.52
RNF40O75150 MTHFD2P2-201ENST00000407725 247 ntBASIC5.53□□□□□ -1.52
RNF40O75150 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.53□□□□□ -1.52
RNF40O75150 RPL23AP95-201ENST00000426806 265 ntBASIC5.53□□□□□ -1.52
RNF40O75150 RPS11P7-201ENST00000442125 465 ntBASIC5.53□□□□□ -1.52
RNF40O75150 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF40O75150 AL121594.1-201ENST00000475906 575 ntBASIC5.53□□□□□ -1.52
RNF40O75150 AC139453.3-201ENST00000493276 369 ntBASIC5.53□□□□□ -1.52
RNF40O75150 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF40O75150 RNA5SP464-201ENST00000516251 108 ntBASIC5.53□□□□□ -1.52
RNF40O75150 RNU6-572P-201ENST00000516724 80 ntBASIC5.53□□□□□ -1.52
RNF40O75150 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF40O75150 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF40O75150 MIR4716-201ENST00000579628 84 ntBASIC5.53□□□□□ -1.52
RNF40O75150 LARP7P3-201ENST00000579888 337 ntBASIC5.53□□□□□ -1.52
RNF40O75150 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF40O75150 AL034408.1-202ENST00000636088 415 ntBASIC5.53□□□□□ -1.52
RNF40O75150 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF40O75150 AC068700.1-201ENST00000565862 3754 ntBASIC5.53□□□□□ -1.52
RNF40O75150 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RNF40O75150 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF40O75150 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
RNF40O75150 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF40O75150 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF40O75150 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF40O75150 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF40O75150 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF40O75150 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF40O75150 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RNF40O75150 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.52□□□□□ -1.53
RNF40O75150 SNORD32A-201ENST00000364805 84 ntBASIC5.52□□□□□ -1.53
RNF40O75150 Y_RNA.337-201ENST00000365312 102 ntBASIC5.52□□□□□ -1.53
RNF40O75150 RNA5SP487-201ENST00000410186 122 ntBASIC5.52□□□□□ -1.53
RNF40O75150 AC007560.1-201ENST00000426912 237 ntBASIC5.52□□□□□ -1.53
RNF40O75150 AC006466.1-201ENST00000438721 289 ntBASIC5.52□□□□□ -1.53
RNF40O75150 AL590399.6-201ENST00000446396 307 ntBASIC5.52□□□□□ -1.53
RNF40O75150 snoU109.2-201ENST00000459316 135 ntBASIC5.52□□□□□ -1.53
RNF40O75150 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF40O75150 RNA5SP228-201ENST00000516232 133 ntBASIC5.52□□□□□ -1.53
RNF40O75150 RNA5SP76-201ENST00000516277 87 ntBASIC5.52□□□□□ -1.53
RNF40O75150 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF40O75150 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF40O75150 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF40O75150 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.52□□□□□ -1.53
RNF40O75150 AC027309.3-201ENST00000623419 351 ntBASIC5.52□□□□□ -1.53
RNF40O75150 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF40O75150 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF40O75150 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF40O75150 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF40O75150 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF40O75150 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF40O75150 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 MAPK10-349ENST00000641767 3661 ntBASIC5.51□□□□□ -1.53
RNF40O75150 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RNF40O75150 SNORA17.1-201ENST00000362945 126 ntBASIC5.51□□□□□ -1.53
RNF40O75150 RNU6-763P-201ENST00000390865 106 ntBASIC5.51□□□□□ -1.53
RNF40O75150 U3.22-201ENST00000391120 215 ntBASIC5.51□□□□□ -1.53
RNF40O75150 RNU6-460P-201ENST00000391158 108 ntBASIC5.51□□□□□ -1.53
RNF40O75150 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 AL035079.1-201ENST00000405210 287 ntBASIC5.51□□□□□ -1.53
RNF40O75150 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF40O75150 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF40O75150 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 AC243964.1-201ENST00000441814 261 ntBASIC5.51□□□□□ -1.53
RNF40O75150 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF40O75150 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF40O75150 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF40O75150 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.51□□□□□ -1.53
RNF40O75150 AC090877.1-201ENST00000561418 344 ntBASIC5.51□□□□□ -1.53
RNF40O75150 AL078604.3-201ENST00000615580 211 ntBASIC5.51□□□□□ -1.53
RNF40O75150 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RNF40O75150 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RNF40O75150 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF40O75150 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF40O75150 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms