Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.52□□□□□ -1.69
CPNE3O75131 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.52□□□□□ -1.69
CPNE3O75131 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.52□□□□□ -1.69
CPNE3O75131 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.52□□□□□ -1.69
CPNE3O75131 AL023881.1-201ENST00000621088 301 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.52□□□□□ -1.69
CPNE3O75131 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.52□□□□□ -1.69
CPNE3O75131 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.52□□□□□ -1.69
CPNE3O75131 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPNE3O75131 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPNE3O75131 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.51□□□□□ -1.69
CPNE3O75131 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
CPNE3O75131 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CPNE3O75131 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CPNE3O75131 RNU6-778P-201ENST00000363269 103 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 RNU1-73P-201ENST00000383971 164 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 MIR548H3-201ENST00000408771 118 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 RPL26P27-201ENST00000414397 437 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 AC098831.1-201ENST00000440661 216 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 AL590664.1-201ENST00000448065 339 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 NDUFS5P3-201ENST00000450668 321 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 RNA5SP249-201ENST00000516127 99 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 AC090617.3-201ENST00000573670 475 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 AC020895.1-201ENST00000595362 272 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 AP001282.2-201ENST00000616149 309 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 MIR376A1-201ENST00000616574 68 ntBASIC4.51□□□□□ -1.69
CPNE3O75131 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
CPNE3O75131 ZFRP1-201ENST00000457579 2970 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.5□□□□□ -1.69
CPNE3O75131 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.5□□□□□ -1.69
CPNE3O75131 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.5□□□□□ -1.69
CPNE3O75131 SNORA31-201ENST00000362607 130 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 SNORA71.2-201ENST00000364941 134 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 RNU6-209P-201ENST00000384118 107 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 MIR215-201ENST00000384858 110 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 MIR548I3-201ENST00000408378 149 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 MIR548I1-201ENST00000408810 149 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 RNA5SP44-201ENST00000410446 133 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 RNU6-1245P-201ENST00000411130 106 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.5□□□□□ -1.69
CPNE3O75131 C4BPAP2-201ENST00000428434 478 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.5□□□□□ -1.69
CPNE3O75131 CYCSP32-201ENST00000440548 321 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 AL162591.2-201ENST00000449634 317 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 AL353705.4-201ENST00000449661 238 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 CEACAMP4-201ENST00000457676 421 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 AC108751.2-201ENST00000469993 231 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.5□□□□□ -1.69
CPNE3O75131 RNU6-111P-201ENST00000517179 105 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.5□□□□□ -1.69
CPNE3O75131 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.5□□□□□ -1.69
CPNE3O75131 MIR4697-201ENST00000582977 78 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.5□□□□□ -1.69
CPNE3O75131 SCARNA4-201ENST00000629045 128 ntBASIC4.5□□□□□ -1.69
CPNE3O75131 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.5□□□□□ -1.69
CPNE3O75131 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CPNE3O75131 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.5□□□□□ -1.69
CPNE3O75131 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPNE3O75131 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CPNE3O75131 AC022336.2-201ENST00000568966 2538 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.49□□□□□ -1.69
CPNE3O75131 AC007390.2-201ENST00000606229 3803 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 SRP72P2-201ENST00000344851 1979 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CPNE3O75131 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CPNE3O75131 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CPNE3O75131 RNU6-942P-201ENST00000363002 107 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 SNORD27-201ENST00000363981 72 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 SNORD113.2-201ENST00000364166 89 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 Y_RNA.416-201ENST00000384014 113 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 SNORD115-46-201ENST00000390982 71 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 RNA5SP397-201ENST00000391323 118 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 AL603908.1-201ENST00000406098 201 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 RPS20P14-201ENST00000412545 360 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 RAB9AP3-201ENST00000412737 573 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 TMEM167AP1-201ENST00000423409 219 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 RPL18P10-201ENST00000425606 538 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 BX679664.1-201ENST00000434429 253 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 AC009296.1-201ENST00000443146 155 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 TPT1P12-201ENST00000448968 492 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 RAB9AP1-201ENST00000449393 573 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 HMGB3P8-201ENST00000449709 577 ntBASIC4.49□□□□□ -1.69
CPNE3O75131 ISCUP1-201ENST00000454451 448 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms