Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RPL7P52-201ENST00000449200 742 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 RBM43P1-201ENST00000476891 1081 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 HMGB3P15-201ENST00000507326 574 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC104057.1-201ENST00000515547 497 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC109635.4-202ENST00000531666 412 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.94□□□□□ -1.94
CACNA1FO60840 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC034268.2-201ENST00000571784 482 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AL391646.1-201ENST00000603860 190 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 AC104763.2-201ENST00000604179 382 ntBASIC2.94□□□□□ -1.94
CACNA1FO60840 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CACNA1FO60840 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CACNA1FO60840 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
CACNA1FO60840 AC092447.10-201ENST00000620607 1652 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 MIR21-201ENST00000362134 72 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 RNU6-1226P-201ENST00000384317 107 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 ELOCP4-201ENST00000420090 333 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.93□□□□□ -1.94
CACNA1FO60840 GPR143P-201ENST00000434155 205 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 HMGB1P12-201ENST00000438594 598 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 TPT1P14-201ENST00000448018 505 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.93□□□□□ -1.94
CACNA1FO60840 AP1S2P1-201ENST00000457344 379 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 RNU6-27P-201ENST00000516146 107 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.93□□□□□ -1.94
CACNA1FO60840 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.93□□□□□ -1.94
CACNA1FO60840 AL137847.3-201ENST00000611521 109 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.93□□□□□ -1.94
CACNA1FO60840 AC002546.1-201ENST00000588041 2504 ntBASIC2.93□□□□□ -1.94
CACNA1FO60840 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
CACNA1FO60840 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CACNA1FO60840 Y_RNA.813-201ENST00000364639 102 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 RNU6-483P-201ENST00000384088 108 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 RNU6-1207P-201ENST00000384343 107 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 RNU6-876P-201ENST00000391295 104 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 SNRPGP6-201ENST00000451124 220 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC092001.1-201ENST00000453012 261 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.92□□□□□ -1.94
CACNA1FO60840 ARL4AP2-201ENST00000507378 601 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC093677.1-201ENST00000514414 678 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AC090572.1-201ENST00000519251 160 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AP003034.1-201ENST00000534621 422 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 LSM6P2-201ENST00000552208 177 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC078814.3-201ENST00000553036 491 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AL353997.4-201ENST00000586196 166 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC044792.1-201ENST00000593294 196 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AL009028.1-201ENST00000604895 802 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC113194.1-201ENST00000606037 500 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 TUG1_1.1-201ENST00000610654 145 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC024614.3-201ENST00000637860 256 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CACNA1FO60840 NUP58P1-201ENST00000502546 1738 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CACNA1FO60840 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CACNA1FO60840 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.92□□□□□ -1.94
CACNA1FO60840 RNU6-845P-201ENST00000362578 103 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 Y_RNA.46-201ENST00000362695 102 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 SNORD56.2-201ENST00000363242 71 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 SNORD82-201ENST00000365530 70 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 RNU6-769P-201ENST00000384407 104 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CACNA1FO60840 EEF1A1P40-201ENST00000412883 573 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 ZNF90P2-204ENST00000419323 1075 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 TIMM9P1-201ENST00000436122 256 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 RPS26P56-201ENST00000444468 240 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 MTCYBP18-201ENST00000501056 747 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AC017037.2-201ENST00000513850 890 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AC092470.1-201ENST00000546187 132 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AC025281.1-201ENST00000567026 265 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.92□□□□□ -1.94
CACNA1FO60840 AC007363.1-201ENST00000604736 620 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 Z84480.1-201ENST00000605131 311 ntBASIC2.92□□□□□ -1.94
CACNA1FO60840 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CACNA1FO60840 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CACNA1FO60840 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CACNA1FO60840 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CACNA1FO60840 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CACNA1FO60840 RNU6-441P-201ENST00000384545 106 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 MT-TD-201ENST00000387419 68 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AL513185.2-201ENST00000425543 193 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC008850.1-201ENST00000427546 362 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AC137499.1-201ENST00000427602 88 ntBASIC2.91□□□□□ -1.94
CACNA1FO60840 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.91□□□□□ -1.94
CACNA1FO60840 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms