Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 U2.3-201ENST00000617785 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.19-201ENST00000618602 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 RNU2-1-201ENST00000618664 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.6-201ENST00000619225 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.5-201ENST00000619465 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 U2.10-201ENST00000620268 191 ntBASIC1.37□□□□□ -2.19
SSNA1O43805 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.37□□□□□ -2.19
SSNA1O43805 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
SSNA1O43805 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 MIR424-201ENST00000362227 98 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 RNU6-777P-201ENST00000364265 104 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 RNU6-853P-201ENST00000364306 107 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 U3.12-201ENST00000364498 214 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SSNA1O43805 RNU11-3P-201ENST00000391111 133 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 AL590084.1-201ENST00000407885 387 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 RNA5SP501-201ENST00000410990 112 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 UBE2V1P4-201ENST00000425374 344 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.36□□□□□ -2.19
SSNA1O43805 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 MEMO1P3-201ENST00000459811 302 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.36□□□□□ -2.19
SSNA1O43805 RPS29P11-201ENST00000496507 171 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 RPF2P2-201ENST00000504693 896 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SSNA1O43805 AC009902.1-201ENST00000519351 183 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 OR8K2P-201ENST00000524645 927 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.36□□□□□ -2.19
SSNA1O43805 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SSNA1O43805 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.36□□□□□ -2.19
SSNA1O43805 IMMP1LP2-201ENST00000552954 492 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 AC023825.1-201ENST00000566704 1030 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 CLIC4P2-201ENST00000601934 717 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 RPL21P136-201ENST00000605378 396 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 AC090186.1-201ENST00000605991 572 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 AP000676.3-201ENST00000623299 569 ntBASIC1.36□□□□□ -2.19
SSNA1O43805 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SSNA1O43805 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.35□□□□□ -2.19
SSNA1O43805 AC138393.1-203ENST00000327086 343 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 MIR19A-201ENST00000384878 82 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 MIR518D-201ENST00000385014 87 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SSNA1O43805 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SSNA1O43805 RN7SKP101-201ENST00000411376 320 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.35□□□□□ -2.19
SSNA1O43805 AL592045.1-201ENST00000429867 352 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 HMGB1P27-201ENST00000431429 603 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.35□□□□□ -2.19
SSNA1O43805 MTCO2P20-201ENST00000437339 673 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC003989.2-201ENST00000440224 169 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC005094.1-201ENST00000440420 368 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.35□□□□□ -2.19
SSNA1O43805 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.35□□□□□ -2.19
SSNA1O43805 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.35□□□□□ -2.19
SSNA1O43805 AL672167.3-201ENST00000465951 960 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 RPS3AP14-201ENST00000483907 780 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 RPL23AP63-201ENST00000498752 471 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 FAM206BP-201ENST00000510179 541 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.35□□□□□ -2.19
SSNA1O43805 MTCYBP43-201ENST00000513621 740 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 RNU6-572P-201ENST00000516724 80 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SSNA1O43805 AP003122.3-201ENST00000526316 255 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC005832.3-201ENST00000537929 631 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.35□□□□□ -2.19
SSNA1O43805 AP000763.2-201ENST00000540641 163 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC009063.1-201ENST00000563342 702 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC136619.2-201ENST00000563361 631 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.35□□□□□ -2.19
SSNA1O43805 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.35□□□□□ -2.19
SSNA1O43805 AP002802.2-201ENST00000605877 235 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.35□□□□□ -2.19
SSNA1O43805 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SSNA1O43805 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SSNA1O43805 Y_RNA.578-201ENST00000390903 88 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 MIR1294-201ENST00000408503 142 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 Y_RNA.625-201ENST00000411256 107 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AL953862.1-201ENST00000423016 168 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.34□□□□□ -2.19
SSNA1O43805 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.34□□□□□ -2.19
SSNA1O43805 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.34□□□□□ -2.19
SSNA1O43805 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.34□□□□□ -2.19
SSNA1O43805 BTF3P15-201ENST00000455606 336 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 Y_RNA.675-201ENST00000516389 149 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AP003355.1-201ENST00000518956 587 ntBASIC1.34□□□□□ -2.19
SSNA1O43805 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms