Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC136624.4-201ENST00000573044 370 ntBASIC3.85□□□□□ -1.79
PAX4O43316 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PAX4O43316 MIR4310-201ENST00000582950 57 ntBASIC3.85□□□□□ -1.79
PAX4O43316 AL391261.4-201ENST00000616012 481 ntBASIC3.85□□□□□ -1.79
PAX4O43316 MIR6133-201ENST00000617057 108 ntBASIC3.85□□□□□ -1.79
PAX4O43316 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.85□□□□□ -1.79
PAX4O43316 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.85□□□□□ -1.79
PAX4O43316 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.85□□□□□ -1.79
PAX4O43316 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.85□□□□□ -1.79
PAX4O43316 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 AC009541.1-201ENST00000438279 2662 ntBASIC3.85□□□□□ -1.79
PAX4O43316 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.85□□□□□ -1.79
PAX4O43316 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PAX4O43316 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PAX4O43316 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.84□□□□□ -1.79
PAX4O43316 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.84□□□□□ -1.79
PAX4O43316 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PAX4O43316 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PAX4O43316 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.84□□□□□ -1.79
PAX4O43316 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.84□□□□□ -1.79
PAX4O43316 Y_RNA.17-201ENST00000362433 111 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RNU1-130P-201ENST00000363930 160 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RNA5SP435-201ENST00000364044 108 ntBASIC3.84□□□□□ -1.79
PAX4O43316 SNORD14B-201ENST00000364533 90 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RNU6-497P-201ENST00000365316 104 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RNU6-159P-201ENST00000391080 106 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RNU6-279P-201ENST00000391297 101 ntBASIC3.84□□□□□ -1.79
PAX4O43316 AL391361.1-201ENST00000405580 489 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RN7SKP100-201ENST00000411258 284 ntBASIC3.84□□□□□ -1.79
PAX4O43316 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC3.84□□□□□ -1.79
PAX4O43316 CYCSP12-201ENST00000437729 300 ntBASIC3.84□□□□□ -1.79
PAX4O43316 RPL39P39-201ENST00000455840 151 ntBASIC3.84□□□□□ -1.79
PAX4O43316 AC021205.2-201ENST00000480069 347 ntBASIC3.84□□□□□ -1.79
PAX4O43316 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 RN7SKP21-201ENST00000516503 220 ntBASIC3.84□□□□□ -1.79
PAX4O43316 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.84□□□□□ -1.79
PAX4O43316 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.84□□□□□ -1.79
PAX4O43316 AC009962.1-201ENST00000567327 3813 ntBASIC3.84□□□□□ -1.79
PAX4O43316 MIR1273E-201ENST00000581165 102 ntBASIC3.84□□□□□ -1.79
PAX4O43316 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.84□□□□□ -1.79
PAX4O43316 RPL30P11-203ENST00000598995 310 ntBASIC3.84□□□□□ -1.79
PAX4O43316 AL391903.3-201ENST00000612158 163 ntBASIC3.84□□□□□ -1.79
PAX4O43316 AL078604.3-201ENST00000615580 211 ntBASIC3.84□□□□□ -1.79
PAX4O43316 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.84□□□□□ -1.79
PAX4O43316 AL035470.1-201ENST00000622571 220 ntBASIC3.84□□□□□ -1.79
PAX4O43316 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PAX4O43316 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAX4O43316 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PAX4O43316 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PAX4O43316 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PAX4O43316 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
PAX4O43316 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PAX4O43316 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
PAX4O43316 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PAX4O43316 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PAX4O43316 AC007529.1-201ENST00000418574 2178 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AC104623.2-202ENST00000623477 4002 ntBASIC3.83□□□□□ -1.8
PAX4O43316 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAX4O43316 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PAX4O43316 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.83□□□□□ -1.8
PAX4O43316 U3.9-201ENST00000363823 204 ntBASIC3.83□□□□□ -1.8
PAX4O43316 Y_RNA.319-201ENST00000365138 92 ntBASIC3.83□□□□□ -1.8
PAX4O43316 Y_RNA.346-201ENST00000365385 112 ntBASIC3.83□□□□□ -1.8
PAX4O43316 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.83□□□□□ -1.8
PAX4O43316 RNU6-1014P-201ENST00000383940 103 ntBASIC3.83□□□□□ -1.8
PAX4O43316 SNORA68.2-201ENST00000391263 128 ntBASIC3.83□□□□□ -1.8
PAX4O43316 MIR1302-5-201ENST00000408164 150 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AC074117.2-201ENST00000417130 397 ntBASIC3.83□□□□□ -1.8
PAX4O43316 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.83□□□□□ -1.8
PAX4O43316 AC100832.1-201ENST00000471945 383 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AC092754.1-201ENST00000472975 479 ntBASIC3.83□□□□□ -1.8
PAX4O43316 RN7SL466P-201ENST00000497546 295 ntBASIC3.83□□□□□ -1.8
PAX4O43316 RNU6-857P-201ENST00000515893 110 ntBASIC3.83□□□□□ -1.8
PAX4O43316 RNU6-436P-201ENST00000516171 114 ntBASIC3.83□□□□□ -1.8
PAX4O43316 RNU6-412P-201ENST00000516434 106 ntBASIC3.83□□□□□ -1.8
PAX4O43316 RNU6-1315P-201ENST00000517187 99 ntBASIC3.83□□□□□ -1.8
PAX4O43316 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.83□□□□□ -1.8
PAX4O43316 AL157871.3-201ENST00000557231 293 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AC007012.1-201ENST00000567192 175 ntBASIC3.83□□□□□ -1.8
PAX4O43316 MIR1273C-201ENST00000578669 77 ntBASIC3.83□□□□□ -1.8
PAX4O43316 MIR7853-201ENST00000584820 132 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AC015813.4-201ENST00000610469 179 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AL450472.3-201ENST00000615578 367 ntBASIC3.83□□□□□ -1.8
PAX4O43316 AC074101.1-201ENST00000637861 241 ntBASIC3.83□□□□□ -1.8
PAX4O43316 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAX4O43316 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAX4O43316 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
PAX4O43316 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAX4O43316 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms