Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SCARNA17.2-201ENST00000516334 143 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 RNA5SP148-201ENST00000516527 94 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 RNU6-572P-201ENST00000516724 80 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NPHP1O15259 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.46□□□□□ -1.86
NPHP1O15259 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.46□□□□□ -1.86
NPHP1O15259 AL157871.3-201ENST00000557231 293 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHP1O15259 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.46□□□□□ -1.86
NPHP1O15259 ZNF861P-201ENST00000588126 639 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AL121992.2-201ENST00000606262 256 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AL589743.7-201ENST00000612637 233 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AC012409.4-201ENST00000612923 249 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 SCARNA17.4-201ENST00000614296 143 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AC084035.1-201ENST00000634543 607 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 U6.99-201ENST00000637524 83 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.46□□□□□ -1.86
NPHP1O15259 AC026241.1-201ENST00000517873 2142 ntBASIC3.46□□□□□ -1.86
NPHP1O15259 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP1O15259 ADAM3A-203ENST00000461344 2157 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP1O15259 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
NPHP1O15259 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP1O15259 RNA5SP432-201ENST00000362480 116 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 Y_RNA.201-201ENST00000364052 96 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 Z98749.2-208ENST00000381646 500 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 RPL21P75-201ENST00000396599 483 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 RPL21P28-201ENST00000401418 483 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AL592114.1-201ENST00000403842 483 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP1O15259 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP1O15259 RPS15AP7-201ENST00000439294 405 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AC244505.5-201ENST00000443639 207 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 OSTCP8-201ENST00000445117 448 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 MTCYBP1-201ENST00000454315 1119 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP1O15259 RPL21P39-201ENST00000463605 483 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 RPL21P93-201ENST00000480465 489 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AC087190.1-201ENST00000484462 480 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AC093591.1-201ENST00000491435 481 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 RPL21P16-201ENST00000495531 483 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP1O15259 AP003072.2-201ENST00000527756 676 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 MIR1273C-201ENST00000578669 77 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AC005261.5-201ENST00000596280 355 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AL161734.1-201ENST00000609720 557 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 AL590808.1-201ENST00000618696 141 ntBASIC3.45□□□□□ -1.86
NPHP1O15259 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP1O15259 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP1O15259 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP1O15259 SNORA51.4-201ENST00000364993 124 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 SET-203ENST00000372688 801 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP1O15259 AL139039.1-201ENST00000401900 692 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 FO393413.1-201ENST00000402892 195 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 MIR1302-8-201ENST00000408342 128 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 RNU6-1025P-201ENST00000410629 104 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP1O15259 OR51A5P-201ENST00000415429 942 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP1O15259 C1DP2-201ENST00000418167 426 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP1O15259 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP1O15259 RPL31P35-201ENST00000431058 377 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 DPPA3P1-201ENST00000448050 469 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP1O15259 ANXA2P1-201ENST00000505539 926 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP1O15259 SNORD19.2-201ENST00000516978 73 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 SNORA31.19-201ENST00000517079 126 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 SCARNA11.3-201ENST00000517276 130 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP1O15259 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP1O15259 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP1O15259 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP1O15259 AC007151.1-201ENST00000572774 483 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP1O15259 OR1M4P-201ENST00000589199 287 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC040904.1-201ENST00000590850 223 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AL391813.1-201ENST00000603098 260 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AC087752.4-201ENST00000605911 462 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 AL139286.2-201ENST00000606838 396 ntBASIC3.44□□□□□ -1.86
NPHP1O15259 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.44□□□□□ -1.86
NPHP1O15259 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP1O15259 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPHP1O15259 RNU6-61P-201ENST00000365528 109 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 MIR627-201ENST00000384979 97 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 SNORA40C-201ENST00000391285 128 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHP1O15259 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 MTATP6P16-201ENST00000434543 526 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AL513043.1-201ENST00000439124 535 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 USP9YP29-201ENST00000445112 563 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 MTND1P27-201ENST00000451117 902 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP1O15259 RNU5F-8P-201ENST00000515941 111 ntBASIC3.43□□□□□ -1.86
NPHP1O15259 RNU6-123P-201ENST00000516163 102 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms