Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL109918.3-201ENST00000603072 338 ntBASIC2.02□□□□□ -2.09
LSM1O15116 AC090970.3-201ENST00000612566 866 ntBASIC2.02□□□□□ -2.09
LSM1O15116 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.02□□□□□ -2.09
LSM1O15116 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.02□□□□□ -2.09
LSM1O15116 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
LSM1O15116 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM1O15116 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM1O15116 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM1O15116 GSTA9P-201ENST00000406231 611 ntBASIC2.01□□□□□ -2.09
LSM1O15116 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.01□□□□□ -2.09
LSM1O15116 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM1O15116 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM1O15116 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM1O15116 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM1O15116 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.01□□□□□ -2.09
LSM1O15116 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.01□□□□□ -2.09
LSM1O15116 RPL22P13-201ENST00000493291 347 ntBASIC2.01□□□□□ -2.09
LSM1O15116 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.01□□□□□ -2.09
LSM1O15116 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.01□□□□□ -2.09
LSM1O15116 AC116655.1-201ENST00000508324 901 ntBASIC2.01□□□□□ -2.09
LSM1O15116 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM1O15116 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM1O15116 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.01□□□□□ -2.09
LSM1O15116 AP004247.1-201ENST00000531556 1289 ntBASIC2.01□□□□□ -2.09
LSM1O15116 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM1O15116 AC012213.3-201ENST00000577199 777 ntBASIC2.01□□□□□ -2.09
LSM1O15116 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LSM1O15116 AC090897.2-201ENST00000581715 130 ntBASIC2.01□□□□□ -2.09
LSM1O15116 AL158050.2-201ENST00000605336 568 ntBASIC2.01□□□□□ -2.09
LSM1O15116 RNU4-5P-201ENST00000607255 135 ntBASIC2.01□□□□□ -2.09
LSM1O15116 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LSM1O15116 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LSM1O15116 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2□□□□□ -2.09
LSM1O15116 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
LSM1O15116 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2□□□□□ -2.09
LSM1O15116 EDDM3CP-201ENST00000415977 425 ntBASIC2□□□□□ -2.09
LSM1O15116 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2□□□□□ -2.09
LSM1O15116 RPS15AP9-201ENST00000439856 381 ntBASIC2□□□□□ -2.09
LSM1O15116 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2□□□□□ -2.09
LSM1O15116 USP9YP8-201ENST00000441913 500 ntBASIC2□□□□□ -2.09
LSM1O15116 NEFMP1-201ENST00000443423 1006 ntBASIC2□□□□□ -2.09
LSM1O15116 RPL7P36-201ENST00000444633 681 ntBASIC2□□□□□ -2.09
LSM1O15116 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2□□□□□ -2.09
LSM1O15116 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2□□□□□ -2.09
LSM1O15116 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2□□□□□ -2.09
LSM1O15116 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2□□□□□ -2.09
LSM1O15116 AC011005.2-201ENST00000487324 359 ntBASIC2□□□□□ -2.09
LSM1O15116 AC098799.1-201ENST00000504752 800 ntBASIC2□□□□□ -2.09
LSM1O15116 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2□□□□□ -2.09
LSM1O15116 AC105185.1-201ENST00000518705 535 ntBASIC2□□□□□ -2.09
LSM1O15116 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2□□□□□ -2.09
LSM1O15116 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LSM1O15116 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2□□□□□ -2.09
LSM1O15116 AC233702.2-202ENST00000562547 291 ntBASIC2□□□□□ -2.09
LSM1O15116 AC009063.1-201ENST00000563342 702 ntBASIC2□□□□□ -2.09
LSM1O15116 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2□□□□□ -2.09
LSM1O15116 AC078899.2-201ENST00000595282 212 ntBASIC2□□□□□ -2.09
LSM1O15116 AC009314.1-201ENST00000603871 304 ntBASIC2□□□□□ -2.09
LSM1O15116 AC104763.2-201ENST00000604179 382 ntBASIC2□□□□□ -2.09
LSM1O15116 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2□□□□□ -2.09
LSM1O15116 AC097478.2-201ENST00000610572 514 ntBASIC2□□□□□ -2.09
LSM1O15116 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2□□□□□ -2.09
LSM1O15116 AP000484.1-201ENST00000620067 1252 ntBASIC2□□□□□ -2.09
LSM1O15116 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2□□□□□ -2.09
LSM1O15116 TEX21P-201ENST00000447107 1476 ntBASIC2□□□□□ -2.09
LSM1O15116 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM1O15116 RNU6-234P-201ENST00000365229 104 ntBASIC1.99□□□□□ -2.09
LSM1O15116 RNU6-278P-201ENST00000390945 109 ntBASIC1.99□□□□□ -2.09
LSM1O15116 SNORA40C-201ENST00000391285 128 ntBASIC1.99□□□□□ -2.09
LSM1O15116 RNU4-53P-201ENST00000410828 140 ntBASIC1.99□□□□□ -2.09
LSM1O15116 RPS12P24-201ENST00000412619 387 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 AL135786.1-201ENST00000415892 214 ntBASIC1.99□□□□□ -2.09
LSM1O15116 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 AC092648.1-201ENST00000425870 423 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM1O15116 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.99□□□□□ -2.09
LSM1O15116 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.99□□□□□ -2.09
LSM1O15116 RPL36AP48-201ENST00000485521 314 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AC023194.1-201ENST00000493084 308 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM1O15116 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
LSM1O15116 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM1O15116 VN1R82P-201ENST00000601481 356 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AL713866.2-201ENST00000603579 219 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AL158042.1-201ENST00000605338 460 ntBASIC1.99□□□□□ -2.09
LSM1O15116 AC091965.4-201ENST00000607691 587 ntBASIC1.99□□□□□ -2.09
LSM1O15116 RNU6-91P-201ENST00000607774 107 ntBASIC1.99□□□□□ -2.09
LSM1O15116 U6.99-201ENST00000637524 83 ntBASIC1.99□□□□□ -2.09
LSM1O15116 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM1O15116 RNU6-511P-201ENST00000363496 107 ntBASIC1.98□□□□□ -2.09
LSM1O15116 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM1O15116 XGY1-201ENST00000381172 446 ntBASIC1.98□□□□□ -2.09
LSM1O15116 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.98□□□□□ -2.09
LSM1O15116 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms