Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.52□□□□□ -2.33
CACNA1AO00555 VN1R81P-201ENST00000602085 372 ntBASIC0.52□□□□□ -2.33
CACNA1AO00555 SDAD1P2-201ENST00000441308 2028 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 MIR587-201ENST00000384845 96 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AC068050.1-201ENST00000394891 380 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 Z80107.1-201ENST00000436830 412 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AL513343.1-201ENST00000451818 792 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AC010301.1-201ENST00000473936 355 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 EIF4EP3-201ENST00000498782 656 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.51□□□□□ -2.33
CACNA1AO00555 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.51□□□□□ -2.33
CACNA1AO00555 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.51□□□□□ -2.33
CACNA1AO00555 AC023824.2-201ENST00000566185 400 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.51□□□□□ -2.33
CACNA1AO00555 MTCO2P22-201ENST00000603246 681 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 NUTF2P8-201ENST00000604593 363 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AL162730.1-201ENST00000605734 292 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 uc_338.6-201ENST00000613544 171 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AL662814.1-201ENST00000617364 121 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 FAM157B-203ENST00000639350 358 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 AL138713.1-201ENST00000624026 2130 ntBASIC0.51□□□□□ -2.33
CACNA1AO00555 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CACNA1AO00555 CBX3P1-201ENST00000325243 554 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 RNU6-600P-201ENST00000362524 99 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 RPS3AP36-201ENST00000398190 775 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 RPS4XP3-201ENST00000398541 413 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 RPL30P13-201ENST00000418873 348 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1AO00555 EIF1P1-201ENST00000421436 341 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1AO00555 HSPE1P24-201ENST00000450782 238 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC005410.1-202ENST00000460347 485 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC021146.2-201ENST00000504736 556 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1AO00555 RNA5SP468-201ENST00000516782 93 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AP005902.1-201ENST00000521358 186 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 MIR3690-201ENST00000580266 75 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC073410.2-201ENST00000603240 332 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AL096840.1-201ENST00000603287 93 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC106791.2-201ENST00000604680 391 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 RN7SL660P-201ENST00000614852 299 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC020923.1-201ENST00000624021 917 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 ZNF519P1-201ENST00000449011 1626 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AL355615.1-201ENST00000406187 641 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 OFD1P18Y-201ENST00000420889 959 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 UBE2D3P2-201ENST00000424409 445 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 SNRPEP4-201ENST00000435815 279 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 RPS24P6-201ENST00000452670 400 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1AO00555 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CACNA1AO00555 AC109927.2-201ENST00000506416 303 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1AO00555 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1AO00555 AC008751.2-201ENST00000597885 980 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC008121.1-201ENST00000603244 268 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC008759.3-201ENST00000613300 508 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AL138726.1-201ENST00000614873 333 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 AC007785.2-201ENST00000598627 1916 ntBASIC0.5□□□□□ -2.33
CACNA1AO00555 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CACNA1AO00555 RNA5SP252-201ENST00000391131 119 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1AO00555 SSXP4-201ENST00000451349 245 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 SNORD124-201ENST00000459577 104 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 RPL23AP54-201ENST00000495129 419 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1AO00555 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1AO00555 AL590282.1-201ENST00000610379 1136 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.49□□□□□ -2.33
CACNA1AO00555 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.49□□□□□ -2.33
CACNA1AO00555 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CACNA1AO00555 RNA5SP391-201ENST00000363456 119 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 MIR627-201ENST00000384979 97 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AL161449.1-201ENST00000414531 1199 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1AO00555 UBE2FP1-201ENST00000416536 447 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.49□□□□□ -2.33
CACNA1AO00555 AL500527.1-201ENST00000448532 255 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.49□□□□□ -2.33
CACNA1AO00555 AC112518.2-201ENST00000508565 425 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC012254.4-201ENST00000588843 273 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC008739.2-201ENST00000597006 317 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC107214.2-201ENST00000608204 634 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AC055764.2-201ENST00000610089 670 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 AL138880.2-201ENST00000616214 239 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.49□□□□□ -2.33
CACNA1AO00555 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CACNA1AO00555 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.49□□□□□ -2.33
CACNA1AO00555 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CACNA1AO00555 RNU6-833P-201ENST00000363486 107 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 RNU6-19P-201ENST00000384718 107 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 RNU6-1077P-201ENST00000410506 102 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1AO00555 RPL31P20-201ENST00000449593 360 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 RNU7-27P-201ENST00000459281 62 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 RNU6-1037P-201ENST00000459571 107 ntBASIC0.48□□□□□ -2.33
CACNA1AO00555 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1AO00555 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.48□□□□□ -2.33
CACNA1AO00555 ERHP1-201ENST00000523006 310 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms