Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC007182.2-201ENST00000489251 402 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 RPL39P36-201ENST00000490784 156 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC105252.1-201ENST00000503089 286 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MTND4P2-201ENST00000507767 1203 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 SCARNA24.1-201ENST00000516465 137 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AP003072.2-201ENST00000527756 676 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 OR5B19P-201ENST00000531766 928 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AL512310.1-201ENST00000548639 172 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC087883.1-201ENST00000551882 391 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 NRBF2P1-201ENST00000587407 859 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC004805.2-201ENST00000605382 482 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC116312.1-201ENST00000606841 314 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AC006566.1-201ENST00000608943 513 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 AL590808.1-201ENST00000618696 141 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 MTND5P42-201ENST00000637720 498 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
NEDD8-MDP1E9PL57 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 MTND5P29-201ENST00000458676 1807 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC073343.1-201ENST00000328239 651 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 RNA5SP289-201ENST00000362332 137 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 RPS12P24-201ENST00000412619 387 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 BTF3L4P1-201ENST00000413813 468 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC080125.1-201ENST00000414888 684 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 RPL31P35-201ENST00000431058 377 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 SNRPEP9-201ENST00000436794 238 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC079448.1-201ENST00000449377 373 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC008571.1-201ENST00000467232 300 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 RPL23AP45-201ENST00000476406 468 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AP003122.3-201ENST00000526316 255 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 DNAJC8P1-201ENST00000554535 372 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AL391261.3-201ENST00000557194 520 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC012213.3-201ENST00000577199 777 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC024619.4-201ENST00000580924 316 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC174048.1-201ENST00000603389 144 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 NUTF2P8-201ENST00000604593 363 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC019159.1-201ENST00000605094 187 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 AC099842.1-201ENST00000619919 596 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 U2.21-201ENST00000637295 81 ntBASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.57□□□□□ -2
NEDD8-MDP1E9PL57 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 RNU6-799P-201ENST00000363567 107 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 RNU6-288P-201ENST00000363690 104 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 RNU1-100P-201ENST00000365255 165 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 CD24P4-201ENST00000382840 243 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 Y_RNA.534-201ENST00000384599 112 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 BX682237.1-201ENST00000415016 335 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC092809.3-201ENST00000415453 231 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 PIGFP2-201ENST00000421400 651 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AL365338.1-201ENST00000422282 858 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 MED13P1-201ENST00000428342 171 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 HMGB1P27-201ENST00000431429 603 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 RPL36AP6-201ENST00000435770 321 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 RPS24P1-201ENST00000438550 371 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC104389.3-201ENST00000445629 235 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 TPT1P7-201ENST00000458300 517 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 RNA5SP165-201ENST00000517142 115 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AP002770.2-201ENST00000543613 532 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 MIR3945-201ENST00000581853 98 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC109347.2-201ENST00000610220 349 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC073308.1-201ENST00000623696 305 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 AC091564.4-201ENST00000533934 2194 ntBASIC2.56□□□□□ -2
NEDD8-MDP1E9PL57 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms