Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 SSXP5-201ENST00000443473 287 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 NDUFB1P2-201ENST00000449477 176 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 UQCRHP3-201ENST00000451503 251 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 RN7SL863P-201ENST00000462370 296 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 RPS29P20-201ENST00000489592 171 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC079140.5-201ENST00000507882 310 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 RNU6-314P-201ENST00000516574 104 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 SUB1P2-201ENST00000556401 297 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC074050.1-201ENST00000563247 211 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 MIR1254-2-201ENST00000579553 63 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 MIR4444-1-201ENST00000581696 74 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 UBL5P2-201ENST00000583788 219 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 MIR4444-2-201ENST00000584390 74 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC007938.3-201ENST00000604965 623 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 CR381653.2-201ENST00000624041 768 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SRRM4A7MD48 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
SRRM4A7MD48 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SRRM4A7MD48 AC004944.1-201ENST00000517807 3059 ntBASIC2.48□□□□□ -2.01
SRRM4A7MD48 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SRRM4A7MD48 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 SNORA51.4-201ENST00000364993 124 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 SNORD67-201ENST00000390833 111 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 Y_RNA.604-201ENST00000410574 102 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 RNU4-47P-201ENST00000410876 114 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 OR51A5P-201ENST00000415429 942 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC092809.3-201ENST00000415453 231 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC009414.1-201ENST00000427200 443 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AL358934.1-201ENST00000432346 324 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 MTND3P21-201ENST00000433774 331 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 WASF1P1-201ENST00000447560 1131 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC109925.1-201ENST00000478069 331 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 MTAPP1-201ENST00000489154 819 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 HMGB1P30-201ENST00000492455 606 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC139453.3-201ENST00000493276 369 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC105417.1-201ENST00000514691 285 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 RNU6-718P-201ENST00000516166 105 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 RNU6-572P-201ENST00000516724 80 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 RNU6-1183P-201ENST00000517054 60 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 SNORA31.19-201ENST00000517079 126 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 RNU6-1220P-201ENST00000517126 108 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 SCARNA11.3-201ENST00000517276 130 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC009902.1-201ENST00000519351 183 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC025755.1-201ENST00000521306 278 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 OR5AL2P-201ENST00000532185 920 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 ZNF519P2-201ENST00000557032 169 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC092325.1-201ENST00000566449 554 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 MIR5680-201ENST00000577577 84 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC008521.1-201ENST00000587471 187 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC019159.1-201ENST00000605094 187 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 Z84480.1-201ENST00000605131 311 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC019176.2-201ENST00000611579 315 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC090517.2-201ENST00000614966 680 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 MIR7112-201ENST00000616126 65 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AL158209.2-201ENST00000619266 216 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC093648.1-201ENST00000623546 606 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 LRRC77P-213ENST00000637727 880 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 AC010889.1-201ENST00000566193 2666 ntBASIC2.47□□□□□ -2.01
SRRM4A7MD48 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.47□□□□□ -2.01
SRRM4A7MD48 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SRRM4A7MD48 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SRRM4A7MD48 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.46□□□□□ -2.02
SRRM4A7MD48 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SRRM4A7MD48 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SRRM4A7MD48 RNU6-1287P-201ENST00000362914 107 ntBASIC2.46□□□□□ -2.02
SRRM4A7MD48 RNA5SP267-201ENST00000364893 126 ntBASIC2.46□□□□□ -2.02
SRRM4A7MD48 SNORD115-7-201ENST00000365306 82 ntBASIC2.46□□□□□ -2.02
SRRM4A7MD48 RNU6-1060P-201ENST00000384664 107 ntBASIC2.46□□□□□ -2.02
SRRM4A7MD48 MIR34A-201ENST00000385130 110 ntBASIC2.46□□□□□ -2.02
SRRM4A7MD48 CISD1P1-201ENST00000393907 327 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms