Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP17L3A6NCW0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.105-201ENST00000363182 111 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.416-201ENST00000384014 113 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 MIR670-201ENST00000390142 98 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 MIR921-201ENST00000401133 56 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 RNU2-25P-201ENST00000411041 191 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 RAC1P3-201ENST00000416129 580 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 SDAD1P3-201ENST00000427380 333 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 MIR2355-201ENST00000517199 87 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 RN7SL703P-201ENST00000578485 302 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 AL160290.3-201ENST00000604869 165 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 AC098479.1-201ENST00000609225 154 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 U4.7-201ENST00000638126 106 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 AL136964.1-201ENST00000622038 2990 ntBASIC5.18□□□□□ -1.58
USP17L3A6NCW0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP17L3A6NCW0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 RNU1-20P-201ENST00000363314 162 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.123-201ENST00000363338 102 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 RPS29P13-201ENST00000402041 169 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 RNU6-121P-201ENST00000410525 99 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 SNORA74C-2-201ENST00000411179 201 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 Z82210.1-201ENST00000440037 231 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AC124916.1-201ENST00000444020 547 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AC009237.8-201ENST00000445492 379 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AL513124.1-201ENST00000450410 614 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 HMGB3P17-201ENST00000504195 649 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 RNU7-175P-201ENST00000515915 61 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 RPL23AP78-201ENST00000599928 470 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 AC007785.2-201ENST00000598627 1916 ntBASIC5.17□□□□□ -1.58
USP17L3A6NCW0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USP17L3A6NCW0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.20-201ENST00000362479 113 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RNA5SP307-201ENST00000362863 116 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RNU6-200P-201ENST00000364743 107 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RNU6-336P-201ENST00000364891 107 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.358-201ENST00000365491 99 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.405-201ENST00000383979 100 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.451-201ENST00000384200 100 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.458-201ENST00000384240 102 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.524-201ENST00000384564 100 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 Y_RNA.561-201ENST00000384694 100 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RPL21P75-201ENST00000396599 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RPL21P28-201ENST00000401418 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RNU6-1203P-201ENST00000410703 110 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AL590556.1-201ENST00000423231 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RPS29P7-201ENST00000439662 171 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AL445433.1-201ENST00000457507 257 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RNU7-87P-201ENST00000459343 62 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RPL21P11-201ENST00000461458 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RPL21P39-201ENST00000463605 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC087190.1-201ENST00000484462 480 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC107032.1-201ENST00000485945 480 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC132942.1-201ENST00000486753 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC093591.1-201ENST00000491435 481 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RPL21P16-201ENST00000495531 483 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC146944.2-203ENST00000502493 354 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC139495.1-202ENST00000513164 354 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 SNORA31.6-201ENST00000516241 130 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 RNU6-111P-201ENST00000517179 105 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 IGKV2-23-201ENST00000518729 323 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC093023.1-201ENST00000547375 507 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC073410.2-201ENST00000603240 332 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC007546.2-201ENST00000623996 360 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 AC112200.1-201ENST00000625015 234 ntBASIC5.16□□□□□ -1.58
USP17L3A6NCW0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.16□□□□□ -1.58
USP17L3A6NCW0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms