Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 MIR5692A1-201ENST00000580523 69 ntBASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 AL138726.1-201ENST00000614873 333 ntBASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 AC134503.1-201ENST00000633048 54 ntBASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 Z83843.1-201ENST00000604070 3685 ntBASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TCRBV5S1A1TA0A578 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 MTND4P27-201ENST00000450813 1354 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 Y_RNA.128-201ENST00000363391 112 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 RNA5SP50-201ENST00000363731 107 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 SNORA62.3-201ENST00000365110 153 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 SNORD116-29-201ENST00000384516 83 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 MIR514A1-201ENST00000385133 98 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 RNY4P36-201ENST00000391116 96 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 MTCYBP4-201ENST00000401524 249 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 BRK1P2-201ENST00000442875 223 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 RPL32P28-201ENST00000443577 397 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 MTND1P17-201ENST00000448961 204 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 HMGB3P30-201ENST00000457863 606 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 snoU13.4-201ENST00000458916 104 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC091153.1-201ENST00000466297 402 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 RPL31P60-201ENST00000478450 367 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC027575.1-201ENST00000481064 460 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC008526.1-201ENST00000509149 338 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 RNU6-143P-201ENST00000516942 93 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AP005639.2-201ENST00000527592 928 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 IMMP1LP2-201ENST00000552954 492 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 MIR3921-201ENST00000577308 85 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC002545.1-201ENST00000592511 181 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC012119.1-201ENST00000603184 222 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC073657.2-201ENST00000605661 303 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AL355810.1-201ENST00000614629 552 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
TCRBV5S1A1TA0A578 OR4G2P-202ENST00000641004 1759 ntBASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TCRBV5S1A1TA0A578 UBE2L2-201ENST00000254302 429 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 SNORA71.3-201ENST00000362582 128 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU6-562P-201ENST00000362731 107 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 Y_RNA.135-201ENST00000363439 95 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 SNORD56.3-201ENST00000363507 71 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU6-128P-201ENST00000383976 107 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 Y_RNA.482-201ENST00000384377 111 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 Y_RNA.534-201ENST00000384599 112 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 MIR200C-201ENST00000384980 68 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AL139397.2-201ENST00000404529 772 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 RNU6-370P-201ENST00000411008 104 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 RPL21P90-201ENST00000415692 466 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 BTF3L4P3-201ENST00000418879 476 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AL451062.2-201ENST00000427515 271 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 MTND4P19-201ENST00000446659 478 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 Z75741.1-201ENST00000446793 314 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC096576.1-201ENST00000489014 359 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 HMGB3P15-201ENST00000507326 574 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AL359273.1-201ENST00000510918 627 ntBASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.4□□□□□ -1.87
TCRBV5S1A1TA0A578 MED28P6-201ENST00000558776 231 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms