Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC008737.2-201ENST00000599446 118 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 AL137849.1-201ENST00000604767 169 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 AC005000.2-201ENST00000605468 310 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 AC107294.1-201ENST00000609524 467 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 AL133215.3-201ENST00000609801 448 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 AC104237.2-201ENST00000612456 443 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 AC007823.1-201ENST00000569932 1566 ntBASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC187A0A096LP49 MAPK10-373ENST00000641983 6772 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 UBE2L2-201ENST00000254302 429 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RNU6-1167P-201ENST00000363227 94 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 Y_RNA.202-201ENST00000364083 110 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RNU1-33P-201ENST00000364249 162 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 Y_RNA.395-201ENST00000383945 109 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 MIR493-201ENST00000385254 89 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 U3.42-201ENST00000408746 214 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RNU4-26P-201ENST00000410270 107 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC245054.2-201ENST00000415639 319 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 UBE2D3P2-201ENST00000424409 445 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RNU7-152P-201ENST00000458982 64 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RN7SL807P-201ENST00000470923 297 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC090096.1-201ENST00000489168 390 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC005741.1-201ENST00000511094 432 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 APOOP4-201ENST00000513530 597 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RNU4-49P-201ENST00000516080 140 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RN7SKP57-201ENST00000517248 293 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AC011471.1-201ENST00000585766 187 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 POLR3GP2-201ENST00000588366 668 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 MIR8058-201ENST00000615737 89 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AL132822.1-201ENST00000617063 513 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 AL133216.2-202ENST00000634512 349 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 ZNF807-201ENST00000328088 1707 ntBASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC187A0A096LP49 IPO8P1-201ENST00000455509 3109 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 RNU6-741P-201ENST00000383889 107 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 SNORA11.2-201ENST00000408318 127 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 NDUFB4P5-201ENST00000415445 361 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AC005019.1-201ENST00000436455 431 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 RBMY2UP-201ENST00000453474 324 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 MTND4P17-201ENST00000470444 350 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 RNA5SP208-201ENST00000516156 78 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 RNU6-914P-201ENST00000516749 109 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AL080274.1-201ENST00000605565 220 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 MIR15A-201ENST00000607334 83 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 AC118273.1-201ENST00000525324 3006 ntBASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC187A0A096LP49 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 AL136164.4-201ENST00000625013 2135 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 Y_RNA.100-201ENST00000363141 102 ntBASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC187A0A096LP49 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms