Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AC099778.1-201ENST00000568593 1911 ntBASIC16.96■□□□□ 0.31
USB1Q9BQ65 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 C2orf69P3-201ENST00000565542 1120 ntBASIC16.96■□□□□ 0.31
USB1Q9BQ65 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AL160286.2-201ENST00000567150 934 ntBASIC16.96■□□□□ 0.31
USB1Q9BQ65 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AP000692.2-201ENST00000608391 879 ntBASIC16.96■□□□□ 0.31
USB1Q9BQ65 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USB1Q9BQ65 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USB1Q9BQ65 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USB1Q9BQ65 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USB1Q9BQ65 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.96■□□□□ 0.3
USB1Q9BQ65 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USB1Q9BQ65 AC018445.3-201ENST00000624177 1945 ntBASIC16.96■□□□□ 0.3
USB1Q9BQ65 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
USB1Q9BQ65 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
USB1Q9BQ65 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.96■□□□□ 0.3
USB1Q9BQ65 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 AC079598.2-202ENST00000546624 1451 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 MIR1238-201ENST00000408483 83 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 ECEL1P3-201ENST00000427961 737 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 RN7SL602P-201ENST00000578326 324 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 AC145285.6-201ENST00000604632 637 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USB1Q9BQ65 KRT18P22-201ENST00000402024 1347 ntBASIC16.95■□□□□ 0.3
USB1Q9BQ65 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USB1Q9BQ65 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 AP000525.1-201ENST00000608286 694 ntBASIC16.94■□□□□ 0.3
USB1Q9BQ65 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USB1Q9BQ65 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USB1Q9BQ65 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms