Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 AC003102.1-202ENST00000563394 1796 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 ID1-201ENST00000376105 1233 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L2-201ENST00000561772 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L6-201ENST00000626483 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L1-201ENST00000627662 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L8-201ENST00000629013 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L3-201ENST00000630187 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L7-201ENST00000630678 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DUX4L5-201ENST00000630834 1275 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 AL031602.1-201ENST00000633169 911 ntBASIC16.28■□□□□ 0.2
CITED4Q96RK1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.28■□□□□ 0.2
CITED4Q96RK1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CITED4Q96RK1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 AC027612.3-201ENST00000413684 1047 ntBASIC16.27■□□□□ 0.2
CITED4Q96RK1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.27■□□□□ 0.2
CITED4Q96RK1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 AL691432.2-201ENST00000607222 2038 ntBASIC16.27■□□□□ 0.2
CITED4Q96RK1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CITED4Q96RK1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CITED4Q96RK1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CITED4Q96RK1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 AC135776.1-201ENST00000319817 2481 ntBASIC16.26■□□□□ 0.19
CITED4Q96RK1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 AP005435.1-201ENST00000529293 1178 ntBASIC16.26■□□□□ 0.19
CITED4Q96RK1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.26■□□□□ 0.19
CITED4Q96RK1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CITED4Q96RK1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms