Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LDLRAP1Q5SW96 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AC018445.3-201ENST00000624177 1945 ntBASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AC097488.1-201ENST00000507834 756 ntBASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
LDLRAP1Q5SW96 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 KRT8P11-201ENST00000409686 1436 ntBASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 TSPY23P-201ENST00000440136 739 ntBASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 SLC25A1P4-201ENST00000567977 778 ntBASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 AC005332.7-201ENST00000614046 2005 ntBASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 AC141586.3-201ENST00000562166 1838 ntBASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 AC096733.2-201ENST00000609937 1394 ntBASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
LDLRAP1Q5SW96 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 TEX21P-204ENST00000641479 1693 ntBASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 AP005242.2-201ENST00000580065 1175 ntBASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.92■□□□□ 0.62
LDLRAP1Q5SW96 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDLRAP1Q5SW96 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms