Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 AP000347.1-202ENST00000435868 847 ntBASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 GCSHP2-201ENST00000560971 527 ntBASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 AC099778.1-201ENST00000568593 1911 ntBASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTC1Q2NKJ3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 KRT17P6-201ENST00000453795 1220 ntBASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 MIR3652-201ENST00000579335 131 ntBASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 AC092119.3-201ENST00000612618 583 ntBASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 CR769767.2-201ENST00000622735 460 ntBASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTC1Q2NKJ3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 AC018445.3-201ENST00000624177 1945 ntBASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTC1Q2NKJ3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms