Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.76□□□□□ -2.13
USH1CQ9Y6N9 AC092881.1-201ENST00000638218 2733 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 RNU2-63P-201ENST00000410792 194 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AIMP1P2-201ENST00000425294 312 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 GTF2IP3-201ENST00000433887 494 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 SNRPEP7-201ENST00000438350 220 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 USP9YP15-201ENST00000442391 422 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC008837.2-201ENST00000513076 418 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 UBE2L4-201ENST00000587688 464 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC112220.2-201ENST00000605513 533 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC090186.1-201ENST00000605991 572 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC093673.2-201ENST00000609674 331 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AL109620.1-201ENST00000618738 1197 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 AC109809.1-201ENST00000619665 545 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 ZNF355P-201ENST00000427301 3216 ntBASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.75□□□□□ -2.13
USH1CQ9Y6N9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 RNU6-853P-201ENST00000364306 107 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AL139397.2-201ENST00000404529 772 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AL953862.1-201ENST00000423016 168 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 RPL22P13-201ENST00000493291 347 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 CKS1BP2-201ENST00000497342 240 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC093752.1-206ENST00000511823 336 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AP003168.1-201ENST00000530091 307 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC093012.1-202ENST00000549403 582 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 MTND3P13-201ENST00000574391 343 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 MIR4524B-201ENST00000581569 115 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 VN1R83P-201ENST00000595685 445 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC091057.3-201ENST00000602684 733 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC068790.3-201ENST00000602988 553 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 RPL21P136-201ENST00000605378 396 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC009233.1-201ENST00000616477 371 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AP003400.5-201ENST00000624827 617 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 AC126544.2-201ENST00000625174 749 ntBASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
USH1CQ9Y6N9 Z75746.1-201ENST00000440243 2080 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 RNA5SP432-201ENST00000362480 116 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 RNU6-512P-201ENST00000364438 103 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AL021407.1-201ENST00000404531 386 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 RPS24P7-201ENST00000416921 246 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 XKRYP1-201ENST00000423438 492 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 XKRYP2-201ENST00000432915 492 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 MTCO2P25-201ENST00000447065 681 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 PAXBP1P1-201ENST00000449315 447 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 FABP5P15-201ENST00000453566 214 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 MTCO1P42-201ENST00000457379 726 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 RNU6-581P-201ENST00000516214 105 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 RNU6-703P-201ENST00000516946 107 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AC022880.1-201ENST00000534017 973 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AL133153.1-201ENST00000557756 303 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AC090079.2-201ENST00000575289 768 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 AL355297.2-201ENST00000604792 129 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.73□□□□□ -2.13
USH1CQ9Y6N9 UBE2L2-201ENST00000254302 429 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 NACAP2-201ENST00000318548 624 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 RNA5SP276-201ENST00000362580 94 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 RNU4-51P-201ENST00000364206 140 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 MIR1284-201ENST00000408337 120 ntBASIC1.72□□□□□ -2.13
USH1CQ9Y6N9 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms