| BACE2 | Q9Y5Z0 | TRAV32-201 | ENST00000553993 | 340 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MIR3921-201 | ENST00000577308 | 85 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL121917.1-203 | ENST00000605534 | 577 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | PRR13P7-201 | ENST00000605538 | 430 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | SNORD58B-201 | ENST00000607313 | 66 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC090425.1-201 | ENST00000610007 | 140 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL713922.2-201 | ENST00000619384 | 716 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LINC02246-205 | ENST00000627623 | 417 nt | TSL 5 BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ENPP3-202 | ENST00000358229 | 3026 nt | TSL 1 (best) BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC018529.3-201 | ENST00000624212 | 2254 nt | BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ZPLD1-202 | ENST00000466937 | 1531 nt | APPRIS P1 TSL 1 (best) BASIC | 4.25 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ZNF43-210 | ENST00000598381 | 3004 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | SMC6-203 | ENST00000402989 | 3729 nt | APPRIS P1 TSL 2 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | BIRC3-206 | ENST00000532808 | 4238 nt | APPRIS P1 TSL 5 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | PLS3-203 | ENST00000420625 | 3150 nt | TSL 5 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | TNNI3K-201 | ENST00000326637 | 3001 nt | APPRIS P1 TSL 1 (best) BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-596P-201 | ENST00000365395 | 98 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-101P-201 | ENST00000410323 | 104 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | CEP57L1P1-201 | ENST00000430943 | 1201 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL445584.1-201 | ENST00000431451 | 330 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL353997.1-201 | ENST00000432936 | 108 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | TRAPPC2P8-201 | ENST00000440676 | 396 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL133547.1-201 | ENST00000448546 | 220 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL500522.2-201 | ENST00000448562 | 343 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC010891.1-201 | ENST00000449963 | 448 nt | TSL 2 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | U8.20-201 | ENST00000459445 | 131 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | HMGN1P11-201 | ENST00000508668 | 303 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC111194.2-201 | ENST00000511222 | 455 nt | TSL 5 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LINC01256-201 | ENST00000513270 | 508 nt | TSL 2 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC025871.1-201 | ENST00000523935 | 443 nt | TSL 2 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AF111169.4-202 | ENST00000553507 | 262 nt | TSL 3 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL355598.1-201 | ENST00000604169 | 202 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MIR432-201 | ENST00000606207 | 94 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | 5S_rRNA.16-201 | ENST00000612928 | 119 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL606534.2-204 | ENST00000635008 | 178 nt | BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | PUS7L-207 | ENST00000551923 | 3313 nt | APPRIS P1 TSL 1 (best) BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | OR8D1-203 | ENST00000641897 | 8285 nt | APPRIS P1 BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MPDZ-215 | ENST00000541718 | 7603 nt | APPRIS P3 TSL 1 (best) BASIC | 4.24 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | TMEM71-201 | ENST00000356838 | 1993 nt | APPRIS P3 TSL 1 (best) BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LINC01094-203 | ENST00000504675 | 1985 nt | TSL 2 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LINC00648-202 | ENST00000555985 | 2885 nt | TSL 2 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MPDZ-211 | ENST00000536827 | 6176 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ENPP2-202 | ENST00000259486 | 3233 nt | APPRIS P3 TSL 1 (best) BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | BCAP29-203 | ENST00000379119 | 5773 nt | TSL 3 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.314-201 | ENST00000365114 | 102 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-1181P-201 | ENST00000384191 | 106 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-933P-201 | ENST00000384424 | 107 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MIR708-201 | ENST00000390708 | 88 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNA5SP171-201 | ENST00000391071 | 115 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.618-201 | ENST00000410949 | 107 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LHFPL3-AS1-203 | ENST00000417290 | 950 nt | TSL 1 (best) BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RPL27AP8-201 | ENST00000424277 | 446 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL031274.1-201 | ENST00000450334 | 232 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LINC01005-202 | ENST00000451440 | 531 nt | TSL 4 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | FABP5P15-201 | ENST00000453566 | 214 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL445465.2-201 | ENST00000455530 | 461 nt | TSL 2 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC010469.1-201 | ENST00000463864 | 576 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC132825.2-201 | ENST00000483901 | 504 nt | TSL 5 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RPL17P19-201 | ENST00000489069 | 552 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ACA59.1-201 | ENST00000515966 | 143 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNA5SP179-201 | ENST00000517284 | 121 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | LINC00944-201 | ENST00000536517 | 421 nt | TSL 2 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL590235.2-201 | ENST00000602641 | 632 nt | TSL 5 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC091167.4-201 | ENST00000605079 | 184 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC018889.1-201 | ENST00000605372 | 397 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AP003481.1-201 | ENST00000637808 | 351 nt | TSL 5 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | TRMT10A-203 | ENST00000394877 | 3516 nt | APPRIS P1 TSL 2 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | SLC44A5-202 | ENST00000370859 | 3896 nt | APPRIS ALT2 TSL 2 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | OR8D1-202 | ENST00000641015 | 8286 nt | APPRIS P1 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC066616.2-201 | ENST00000559334 | 1481 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MBNL1-224 | ENST00000545754 | 5147 nt | TSL 5 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | NCAPGP1-201 | ENST00000505112 | 1814 nt | BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ZC3H11A-214 | ENST00000639812 | 11825 nt | APPRIS P1 TSL 5 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ZNF480-202 | ENST00000335090 | 2722 nt | TSL 3 BASIC | 4.23 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RANBP2-201 | ENST00000283195 | 11711 nt | APPRIS P1 TSL 1 (best) BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ZNF616-201 | ENST00000330123 | 2563 nt | TSL 1 (best) BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | CACNB4-257 | ENST00000637547 | 7658 nt | TSL 5 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL133412.1-201 | ENST00000380194 | 2992 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ANKRD26P2-201 | ENST00000445530 | 1710 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MIR412-201 | ENST00000362142 | 91 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.48-201 | ENST00000362710 | 103 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-238P-201 | ENST00000363313 | 106 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.245-201 | ENST00000364493 | 95 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RNU6-823P-201 | ENST00000391042 | 103 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL592148.1-201 | ENST00000413568 | 445 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | NDUFB4P7-201 | ENST00000423198 | 363 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL592466.1-201 | ENST00000428346 | 307 nt | TSL 5 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | MYL8P-204 | ENST00000431574 | 518 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC093083.1-201 | ENST00000438633 | 347 nt | TSL 3 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL591501.1-201 | ENST00000439992 | 495 nt | TSL 5 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | HMGN2P21-201 | ENST00000447764 | 270 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | NHS-AS1-201 | ENST00000452788 | 366 nt | TSL 3 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AC112492.4-201 | ENST00000456549 | 352 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | snoU13.4-201 | ENST00000458916 | 104 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | CREM-226 | ENST00000469949 | 721 nt | TSL 3 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | ODF2L-216 | ENST00000486215 | 311 nt | TSL 2 BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | AL160314.1-201 | ENST00000490836 | 438 nt | BASIC | 4.22 | □□□□□ -1.73 | | |
| BACE2 | Q9Y5Z0 | RN7SL323P-201 | ENST00000494712 | 295 nt | BASIC | 4.22 | □□□□□ -1.73 | | |