Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SCN10AQ9Y5Y9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCN10AQ9Y5Y9 RPS12P24-201ENST00000412619 387 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC092634.6-201ENST00000418558 192 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AL360221.1-201ENST00000445989 335 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AL096803.2-201ENST00000450032 677 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 RPL12P25-201ENST00000455592 494 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC098591.2-201ENST00000510152 315 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AP005639.2-201ENST00000527592 928 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AL132857.1-201ENST00000555180 708 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AP000403.1-201ENST00000603349 851 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AL139344.1-201ENST00000605228 195 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC011939.3-201ENST00000613686 466 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AC079416.3-201ENST00000624479 549 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AL133216.2-202ENST00000634512 349 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 AP000560.1-201ENST00000624150 1937 ntBASIC1.42□□□□□ -2.18
SCN10AQ9Y5Y9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RNU6-884P-201ENST00000363889 107 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 MTND1P21-201ENST00000412991 285 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 TRIM60P13-201ENST00000432350 1283 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC114878.1-201ENST00000441166 358 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RNFT1P2-201ENST00000443064 757 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 MRPL42P4-201ENST00000453267 443 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RPL21P134-201ENST00000453468 483 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC006518.2-201ENST00000542513 940 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC005034.5-201ENST00000604219 466 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 ZNF702P-202ENST00000434269 1966 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC080100.1-201ENST00000624239 5356 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AL356473.1-201ENST00000406203 1408 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RNU6-492P-201ENST00000363035 104 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 Y_RNA.374-201ENST00000365606 101 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 SUGT1P1-201ENST00000379514 476 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RNU6-883P-201ENST00000384597 107 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 MIR217-201ENST00000384817 110 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RPL22P22-201ENST00000395439 379 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 HMGB1P17-201ENST00000403495 628 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 SDCBPP1-201ENST00000440192 890 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 MTCYBP11-201ENST00000447254 1109 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC027575.1-201ENST00000481064 460 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC091965.2-201ENST00000512324 613 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 AC091932.3-201ENST00000624223 323 ntBASIC1.41□□□□□ -2.18
SCN10AQ9Y5Y9 RNU6-216P-201ENST00000363282 104 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 RNU6-754P-201ENST00000391166 107 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AL109755.1-201ENST00000401791 649 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 ZFAND6P1-201ENST00000434138 605 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC092393.1-201ENST00000439625 742 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 RNA5SP112-201ENST00000515937 99 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 NRON-201ENST00000517270 370 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC008121.1-201ENST00000603244 268 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AC136443.5-201ENST00000603741 370 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 AL355297.2-201ENST00000604792 129 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 MIR5739-201ENST00000619803 80 ntBASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.4□□□□□ -2.19
SCN10AQ9Y5Y9 VN1R36P-201ENST00000414936 291 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 CR848007.2-201ENST00000424918 787 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 SNRPEP9-201ENST00000436794 238 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 MTCO1P53-201ENST00000441633 699 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 KATNBL1P6-201ENST00000453433 915 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 MTND2P24-201ENST00000453434 806 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 MTND1P9-201ENST00000453775 944 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AL049874.1-201ENST00000489560 388 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AL160314.1-201ENST00000490836 438 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AL137100.2-201ENST00000555786 315 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AL359212.1-201ENST00000556608 614 ntBASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN10AQ9Y5Y9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms