Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 U3.36-201ENST00000408418 213 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 RPL26P27-201ENST00000414397 437 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AL512844.2-201ENST00000433990 593 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC007395.1-201ENST00000451333 677 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.638-201ENST00000459374 113 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 RN7SL244P-201ENST00000493405 297 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORD116-28-201ENST00000516123 91 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR5695-201ENST00000579717 85 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR8069-1-201ENST00000616627 86 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR8069-2-201ENST00000621412 86 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 AC112200.1-201ENST00000625015 234 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 U6.106-201ENST00000636360 105 ntBASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA11Q9Y5H2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 SRP72P2-201ENST00000344851 1979 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORA73.1-201ENST00000363107 205 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-281P-201ENST00000384212 103 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 WARS2P1-201ENST00000429678 537 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 NUTF2P3-201ENST00000448540 384 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 PPIAP20-201ENST00000449839 135 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 RPS29P26-201ENST00000477483 171 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AC097462.2-201ENST00000504623 481 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 COX6B1P5-201ENST00000509843 249 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AC093840.1-201ENST00000511599 336 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR4282-201ENST00000583613 67 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AC020895.1-201ENST00000595362 272 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 SUMO2P15-201ENST00000604285 278 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 AC022336.2-201ENST00000568966 2538 ntBASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA11Q9Y5H2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR410-201ENST00000362222 80 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.82-201ENST00000363000 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU5B-2P-201ENST00000363036 113 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.92-201ENST00000363043 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.235-201ENST00000364412 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 SNORD32A-201ENST00000364805 84 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.306-201ENST00000365015 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.312-201ENST00000365089 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.322-201ENST00000365151 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-47P-201ENST00000383866 107 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-20P-201ENST00000384106 107 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-1035P-201ENST00000384477 107 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 MIR10B-201ENST00000385011 110 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RNU6-159P-201ENST00000391080 106 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RPL23AP36-201ENST00000413895 458 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RPL23AP95-201ENST00000426806 265 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 HMGN2P21-201ENST00000447764 270 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC125238.1-201ENST00000448842 249 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AL691482.1-201ENST00000453255 87 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.650-201ENST00000459002 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RN7SL222P-201ENST00000476452 299 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC083982.1-201ENST00000485679 344 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.777-201ENST00000516982 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC027288.2-201ENST00000553028 243 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 H3F3AP1-201ENST00000559984 334 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RN7SL176P-201ENST00000580352 264 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC008749.1-201ENST00000597650 306 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.771-201ENST00000598668 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC087783.2-201ENST00000605070 562 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC019159.1-201ENST00000605094 187 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AL049539.1-201ENST00000611964 459 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 AC006001.4-201ENST00000622243 395 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 Y_RNA.789-201ENST00000622480 102 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 BMS1P21-201ENST00000634565 365 ntBASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHGA11Q9Y5H2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms