Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.399-201ENST00000383955 105 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 RPL31P12-201ENST00000422587 358 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 RPS24P6-201ENST00000452670 400 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 SNORD19B-201ENST00000459623 84 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 TRBV1-201ENST00000476502 284 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 RNU6-390P-201ENST00000516259 103 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 RN7SKP258-201ENST00000517151 304 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AP000889.2-201ENST00000532684 490 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 MTCO3P23-201ENST00000561363 289 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AL138889.2-201ENST00000603883 242 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.812-201ENST00000610788 101 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.784-201ENST00000613803 101 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.787-201ENST00000616522 101 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.780-201ENST00000617336 101 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AC126177.8-201ENST00000618339 1015 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.801-201ENST00000619005 101 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 AL034408.1-202ENST00000636088 415 ntBASIC3.7□□□□□ -1.82
DKK3Q9UBP4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DKK3Q9UBP4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC116096.1-201ENST00000566804 2314 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 RNU6-14P-201ENST00000384630 106 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AL590004.1-201ENST00000405321 300 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AL591034.1-201ENST00000407447 340 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 MTCO2P12-201ENST00000427426 682 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AL591704.1-201ENST00000432574 275 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 CYCSP32-201ENST00000440548 321 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 NEFMP1-201ENST00000443423 1006 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 RPS15AP27-201ENST00000449183 343 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC091179.1-201ENST00000461606 579 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 RPL21P93-201ENST00000480465 489 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC106707.2-201ENST00000484182 374 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 RNU6-189P-201ENST00000516120 101 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 SNORA25.17-201ENST00000517184 124 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC008011.1-201ENST00000545989 227 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 POLR3GP2-201ENST00000588366 668 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC022432.1-201ENST00000595739 310 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC009570.1-201ENST00000609599 745 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AL359547.2-201ENST00000615810 418 ntBASIC3.69□□□□□ -1.82
DKK3Q9UBP4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
DKK3Q9UBP4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC009812.4-201ENST00000569134 1805 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 Y_RNA.394-201ENST00000383942 103 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 RNU6-692P-201ENST00000384496 107 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 RNU6-817P-201ENST00000391083 104 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 MIR548K-201ENST00000408406 116 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 VN1R36P-201ENST00000414936 291 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 MTATP6P4-201ENST00000427725 675 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC091286.1-201ENST00000431233 461 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 snoU13.4-201ENST00000458916 104 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 RPS23P3-201ENST00000470993 430 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC006483.1-201ENST00000487308 313 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC074250.1-201ENST00000511117 192 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 RNU6-123P-201ENST00000516163 102 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 RN7SKP60-201ENST00000516985 239 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 SNORD84-203ENST00000584275 78 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 MIR3942-201ENST00000585264 109 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 BDH2P1-201ENST00000602288 736 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC092747.3-201ENST00000603769 301 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC005000.2-201ENST00000605468 310 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.68□□□□□ -1.82
DKK3Q9UBP4 RMST_8.1-201ENST00000610287 165 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 PART1_1.1-201ENST00000611761 217 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 AC068831.7-201ENST00000616954 363 ntBASIC3.68□□□□□ -1.82
DKK3Q9UBP4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms