Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MIR1321-201ENST00000637766 79 ntBASIC3.42□□□□□ -1.86
HDAC6Q9UBN7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HDAC6Q9UBN7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HDAC6Q9UBN7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 FAM35BP-202ENST00000497389 3337 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 Y_RNA.554-201ENST00000384672 102 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 MIR493-201ENST00000385254 89 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 BTF3P7-201ENST00000407097 488 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 MIR548F1-201ENST00000408667 84 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 RNU2-33P-201ENST00000410344 192 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC080125.1-201ENST00000414888 684 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC245054.2-201ENST00000415639 319 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 USP9YP27-201ENST00000418455 438 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AL353193.1-201ENST00000421444 268 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AL139132.1-201ENST00000431587 344 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 TRBV1-201ENST00000476502 284 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 RPL31P60-201ENST00000478450 367 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 MTAPP1-201ENST00000489154 819 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AL160314.1-201ENST00000490836 438 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 RN7SKP272-201ENST00000516988 232 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 RNA5SP503-201ENST00000517047 117 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC034105.3-201ENST00000565294 442 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 MIR4672-201ENST00000583126 81 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC006023.1-201ENST00000603944 259 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC093788.1-201ENST00000609356 927 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC093648.1-201ENST00000623546 606 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 CUL1P1-201ENST00000509510 2425 ntBASIC3.41□□□□□ -1.86
HDAC6Q9UBN7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HDAC6Q9UBN7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HDAC6Q9UBN7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 SNORA24.1-201ENST00000384401 135 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AL591034.1-201ENST00000407447 340 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 MIR1277-201ENST00000408536 78 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 SEPT14P3-201ENST00000439401 183 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 RPS15AP9-201ENST00000439856 381 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AL732372.2-207ENST00000445840 183 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 MTND1P18-201ENST00000448191 573 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 UQCRHP3-201ENST00000451503 251 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 SEPT14P2-201ENST00000453405 183 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 SEPT14P4-201ENST00000513445 186 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 FO082796.1-201ENST00000523795 183 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 OR5AL2P-201ENST00000532185 920 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 ADI1P3-201ENST00000549509 470 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 MIR4775-201ENST00000581168 75 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC078899.3-201ENST00000599065 212 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC007619.2-201ENST00000605743 379 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.4□□□□□ -1.87
HDAC6Q9UBN7 AC007785.2-201ENST00000598627 1916 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 SNORA62.1-201ENST00000364287 154 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 RNU6-61P-201ENST00000365528 109 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 RNU2-29P-201ENST00000410423 189 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 YPEL5P1-201ENST00000419731 367 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 ELOCP14-201ENST00000428070 331 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 ELOCP7-201ENST00000439968 331 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC016691.1-201ENST00000441321 413 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 CALM1P1-201ENST00000442082 433 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 DPPA3P1-201ENST00000448050 469 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 FDX1P2-201ENST00000450769 375 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AF213884.2-201ENST00000510417 903 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 RNU6-718P-201ENST00000516166 105 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms