Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 PWAR6-201ENST00000552334 4618 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 CKAP2P1-201ENST00000555477 2049 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 ELF2P3-201ENST00000445099 1506 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP35Q9P2H5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 RNU6-371P-201ENST00000364283 108 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 RNU6-805P-201ENST00000365643 106 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 SNORA40C-201ENST00000391285 128 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL357075.1-201ENST00000404107 726 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL354719.1-201ENST00000406535 843 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL031121.1-201ENST00000406553 254 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 RNA5SP293-201ENST00000410527 113 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC017079.2-201ENST00000416102 485 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 HSPE1P1-201ENST00000421494 318 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL353729.1-201ENST00000425044 720 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 RPS3AP44-201ENST00000425466 790 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 USP9YP18-201ENST00000425912 695 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 MTND1P4-201ENST00000435196 415 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC098831.1-201ENST00000440661 216 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 SNRPFP3-201ENST00000457792 225 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC128713.1-201ENST00000471495 306 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 RPS27AP10-201ENST00000496103 208 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 RNU6-835P-201ENST00000516974 104 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC025755.1-201ENST00000521306 278 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 MTCO3P24-201ENST00000572729 782 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 AL162413.1-201ENST00000603198 110 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.63□□□□□ -1.67
USP35Q9P2H5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 AP003355.3-201ENST00000623465 114 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP35Q9P2H5 MTND4P14-201ENST00000435799 1354 ntBASIC4.63□□□□□ -1.67
USP35Q9P2H5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP35Q9P2H5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 AC110491.1-201ENST00000562191 2010 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 RNU1-75P-201ENST00000347264 129 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 MIR412-201ENST00000362142 91 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 SNORA69-201ENST00000383895 132 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 BPY2DP-201ENST00000422208 265 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP35Q9P2H5 NDUFB1P2-201ENST00000449477 176 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 RPL27AP5-201ENST00000469428 449 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 HIF1AP1-201ENST00000553642 175 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 AL162713.1-201ENST00000604480 262 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 NUTF2P8-201ENST00000604593 363 ntBASIC4.62□□□□□ -1.67
USP35Q9P2H5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.62□□□□□ -1.67
USP35Q9P2H5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP35Q9P2H5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP35Q9P2H5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 Y_RNA.402-201ENST00000383972 102 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 RNU6-301P-201ENST00000384277 107 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 EIF1P1-201ENST00000421436 341 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 MTCYBP8-201ENST00000422855 651 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 Z99127.3-201ENST00000448158 395 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 RPS27P29-201ENST00000463110 252 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC104472.2-201ENST00000469035 601 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 RPL23AP11-201ENST00000475260 469 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 RPS4XP22-201ENST00000480755 780 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC022493.1-201ENST00000492984 337 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC009901.1-201ENST00000506703 541 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC008716.1-201ENST00000511084 513 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 RNU6-1281P-201ENST00000516223 105 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 SUB1P1-201ENST00000524415 382 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC109635.3-201ENST00000529536 185 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AL137161.1-201ENST00000532231 390 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AK6P1-201ENST00000540219 478 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 HMGN2P15-201ENST00000585707 270 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 U6.42-201ENST00000618440 107 ntBASIC4.61□□□□□ -1.67
USP35Q9P2H5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.61□□□□□ -1.67
USP35Q9P2H5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP35Q9P2H5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP35Q9P2H5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.6□□□□□ -1.67
USP35Q9P2H5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP35Q9P2H5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP35Q9P2H5 RNY4P14-201ENST00000363656 96 ntBASIC4.6□□□□□ -1.67
USP35Q9P2H5 SNORA5B-201ENST00000363786 132 ntBASIC4.6□□□□□ -1.67
USP35Q9P2H5 Y_RNA.381-201ENST00000365666 102 ntBASIC4.6□□□□□ -1.67
USP35Q9P2H5 Y_RNA.554-201ENST00000384672 102 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms