Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 RNA5SP257-201ENST00000363023 116 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 SNORD14B-201ENST00000364533 90 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 CIR1P3-201ENST00000405137 479 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AL161449.1-201ENST00000414531 1199 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC099548.1-201ENST00000421443 426 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 RPL7P34-201ENST00000433316 712 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 ANKRD26P4-201ENST00000455755 950 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 PMCHL2-203ENST00000457791 237 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AL121769.1-201ENST00000469473 401 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC026801.1-201ENST00000497178 464 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC103833.1-201ENST00000517442 172 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 MIR6513-201ENST00000621188 64 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 AC010329.5-201ENST00000623497 2174 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 CCT4P2-201ENST00000233836 1548 ntBASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-217P-201ENST00000384164 104 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL356131.1-201ENST00000405826 414 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 RPL21P90-201ENST00000415692 466 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 TAAR7P-201ENST00000436141 242 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL929288.2-201ENST00000446368 407 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL353718.1-201ENST00000451028 517 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL049714.1-201ENST00000466686 347 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 NDUFB4P2-201ENST00000509515 391 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 SCARNA11.3-201ENST00000517276 130 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 SULT1C2P1-202ENST00000562418 459 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL355877.2-201ENST00000603670 358 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 FTX_3.1-201ENST00000610451 147 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL592148.2-201ENST00000612210 372 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC090772.4-201ENST00000623599 362 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-270P-201ENST00000364131 105 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-115P-201ENST00000364310 107 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 MIR16-1-201ENST00000385271 89 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 MIR676-201ENST00000390702 67 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 MIR936-201ENST00000401264 98 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL592310.1-201ENST00000414330 671 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL691517.1-201ENST00000440833 1235 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC016691.1-201ENST00000441321 413 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC092757.1-201ENST00000467293 467 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC147055.4-201ENST00000504399 745 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 RNU5F-8P-201ENST00000515941 111 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC092451.2-201ENST00000538746 658 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC012414.2-201ENST00000559474 187 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC007151.1-201ENST00000572774 483 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 AC022513.1-201ENST00000624512 117 ntBASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
PHRF1Q9P1Y6 MTND5P11-201ENST00000511037 1812 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 MTND5P9-201ENST00000503854 1755 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-619P-201ENST00000365146 108 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 MIR325-201ENST00000385260 98 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-1328P-201ENST00000410938 106 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 AL049734.2-201ENST00000441066 616 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 SUMO2P2-201ENST00000456482 255 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 AC118273.2-201ENST00000532092 465 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 OR1M4P-201ENST00000589199 287 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 DUXAP11-201ENST00000603858 526 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 MIR4275-201ENST00000636486 87 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.17□□□□□ -2.22
PHRF1Q9P1Y6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC009541.1-201ENST00000438279 2662 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 RNA5SP62-201ENST00000363457 110 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-1005P-201ENST00000384519 107 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 OR6C66P-201ENST00000414917 930 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms