Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 HMGN1P18-201ENST00000457642 277 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AL162395.1-201ENST00000457882 422 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 RNA5SP310-201ENST00000459084 116 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 RPL37P6-201ENST00000460682 294 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC025518.1-201ENST00000479856 347 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 SNORD60.2-201ENST00000516883 86 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 RNA5SP291-201ENST00000517222 105 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC022690.1-201ENST00000526681 550 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 OR5AL2P-201ENST00000532185 920 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC018638.8-201ENST00000588755 281 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC044792.1-201ENST00000593294 196 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AC090617.10-201ENST00000624308 134 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 ASNSP3-201ENST00000451989 1306 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 CUL1P1-201ENST00000509510 2425 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 ZNF807-201ENST00000328088 1707 ntBASIC3.39□□□□□ -1.87
NCKIPSDQ9NZQ3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 OR4G1P-203ENST00000641984 1631 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC007256.1-201ENST00000392253 2765 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 SMIM11P1-201ENST00000369586 178 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 MIR514A2-201ENST00000385131 88 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 MIR514A3-201ENST00000385132 88 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-903P-201ENST00000391270 109 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AL356968.1-201ENST00000416622 474 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 CBWD4P-201ENST00000445695 655 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 RPL38P4-201ENST00000502376 214 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC010486.1-201ENST00000511793 424 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 TTC39CP1-201ENST00000512513 755 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC023050.3-201ENST00000541142 333 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC078795.3-201ENST00000602913 472 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC013553.2-201ENST00000604244 589 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC064836.2-201ENST00000609491 462 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AL390240.1-201ENST00000612950 384 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC009233.1-201ENST00000616477 371 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC002076.2-201ENST00000617362 122 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC011155.2-201ENST00000623202 216 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 AC002546.1-201ENST00000588041 2504 ntBASIC3.38□□□□□ -1.87
NCKIPSDQ9NZQ3 NACAP2-201ENST00000318548 624 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 RNA5SP295-201ENST00000362655 121 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-552P-201ENST00000362869 119 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-61P-201ENST00000365528 109 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 Y_RNA.509-201ENST00000384506 99 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU6-193P-201ENST00000410977 107 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 Z99755.1-201ENST00000414048 380 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC245291.1-201ENST00000419501 328 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 TAAR7P-201ENST00000436141 242 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 NEFMP1-201ENST00000443423 1006 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 SSXP4-201ENST00000451349 245 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 RNU7-182P-201ENST00000459009 62 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 HMGN2P26-201ENST00000463169 339 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 MIR4703-201ENST00000577728 79 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC021646.1-201ENST00000605469 484 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC008962.1-201ENST00000605729 304 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC009570.1-201ENST00000609599 745 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AP001486.3-201ENST00000615334 372 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 MIR8057-201ENST00000620957 69 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 AC100810.6-201ENST00000638068 285 ntBASIC3.37□□□□□ -1.87
NCKIPSDQ9NZQ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms