Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 API5P2-201ENST00000397055 1498 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-552P-201ENST00000362869 119 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-14P-201ENST00000384630 106 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-903P-201ENST00000391270 109 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 RPL36AP53-201ENST00000432891 316 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AL121601.2-201ENST00000438019 707 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 MTND4P25-201ENST00000441039 533 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 CALM1P1-201ENST00000442082 433 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 FABP5P13-201ENST00000452144 328 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 RPL23AP31-201ENST00000456160 467 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AL049874.1-201ENST00000489560 388 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 MTCO2P30-201ENST00000503662 364 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 MED28P6-201ENST00000558776 231 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AL138976.2-201ENST00000563989 694 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 MIR5680-201ENST00000577577 84 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 MIR4703-201ENST00000577728 79 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 BNIP3P10-201ENST00000605360 577 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC068831.7-201ENST00000616954 363 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 AC006504.8-201ENST00000621046 635 ntBASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCAL1Q9NZC9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 OR4G1P-203ENST00000641984 1631 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RNU5A-1-201ENST00000362698 116 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RNU4-20P-201ENST00000365601 151 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-332P-201ENST00000391193 108 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 U3.42-201ENST00000408746 214 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RN7SKP140-201ENST00000411196 284 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RPL21P111-201ENST00000418453 477 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AL353678.1-201ENST00000422735 741 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RPL36AP6-201ENST00000435770 321 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 SNRPEP8-201ENST00000442866 260 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 NEFMP1-201ENST00000443423 1006 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC020550.1-201ENST00000447385 163 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 MTND3P16-201ENST00000452205 344 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 snoU13.4-201ENST00000458916 104 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RPL39P36-201ENST00000490784 156 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC104806.1-201ENST00000508720 308 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC114786.4-201ENST00000508771 728 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 SNORD60.2-201ENST00000516883 86 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 CENPUP1-201ENST00000526649 1202 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 RPL23AP84-201ENST00000571193 464 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 MIR3944-201ENST00000581277 108 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC009994.1-201ENST00000606889 253 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AC107871.2-201ENST00000612894 502 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AL355810.1-201ENST00000614629 552 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 MIR4275-201ENST00000636486 87 ntBASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.13□□□□□ -1.91
SMARCAL1Q9NZC9 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 OR4G2P-202ENST00000641004 1759 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-288P-201ENST00000363690 104 ntBASIC3.12□□□□□ -1.91
SMARCAL1Q9NZC9 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms