Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-157P-201ENST00000383957 107 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 CIR1P3-201ENST00000405137 479 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AL121890.1-201ENST00000435457 205 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 TIMM9P1-201ENST00000436122 256 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC004383.1-201ENST00000438135 289 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 RNA5SP112-201ENST00000515937 99 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 RNU1-41P-201ENST00000516161 162 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 RNU1-48P-201ENST00000516400 162 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC103810.6-201ENST00000606708 136 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 AC144521.1-201ENST00000607148 956 ntBASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KLHL28Q9NXS3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 RNU6-931P-201ENST00000363850 107 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 RNU6-701P-201ENST00000384059 107 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC078974.1-201ENST00000411597 223 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 MTCO2P21-201ENST00000419780 677 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 RPS15AP28-201ENST00000435088 386 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 GPM6BP3-201ENST00000442797 145 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 BRK1P2-201ENST00000442875 223 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 DUXAP8-207ENST00000456786 622 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AP001324.2-201ENST00000461163 319 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 GTF2IP9-201ENST00000502460 301 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 SCARNA1-201ENST00000517138 166 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC118273.2-201ENST00000532092 465 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 DUXAP1-201ENST00000556632 463 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 MTND1P8-201ENST00000571424 950 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC007336.1-201ENST00000576365 3828 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 MIR5007-201ENST00000583098 95 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AL358072.1-201ENST00000604156 575 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC090970.3-201ENST00000612566 866 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC013470.4-201ENST00000619978 986 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 AC006020.1-201ENST00000420179 1854 ntBASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KLHL28Q9NXS3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 RNU6-83P-201ENST00000384568 112 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 RNU6-817P-201ENST00000391083 104 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AL591416.1-201ENST00000404015 867 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC093106.2-201ENST00000428212 385 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 UBE2FP3-201ENST00000436366 524 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 NEFMP1-201ENST00000443423 1006 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 RPL39P36-201ENST00000490784 156 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC104685.1-201ENST00000502445 371 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 RNU6-581P-201ENST00000516214 105 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 BNIP3P40-201ENST00000596017 556 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC009159.1-201ENST00000618386 642 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AL391262.2-201ENST00000622466 494 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC244517.12-201ENST00000623581 663 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 AC006927.4-201ENST00000639187 543 ntBASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KLHL28Q9NXS3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 CDC27P3-201ENST00000635418 1910 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC005336.3-201ENST00000623833 2679 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 RNU6-748P-201ENST00000384648 107 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 SSR1P2-201ENST00000415208 787 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms