Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL035407.1-201ENST00000429211 571 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC084290.1-201ENST00000434995 374 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 BRK1P2-201ENST00000442875 223 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 RNU6-953P-201ENST00000459154 107 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 RPL39P36-201ENST00000490784 156 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 RPL23AP49-201ENST00000492925 468 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 SLC25A15P5-201ENST00000508033 253 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC008526.1-201ENST00000509149 338 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 MTATP6P15-201ENST00000527233 835 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AP001646.1-201ENST00000527936 915 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 CYCSP26-201ENST00000534107 320 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 ANP32BP3-201ENST00000559213 706 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 BNIP3P33-201ENST00000598912 569 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.6-201ENST00000603753 252 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.11-201ENST00000604059 253 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL358072.1-201ENST00000604156 575 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC008162.1-201ENST00000604718 254 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC007363.1-201ENST00000604736 620 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.1-201ENST00000604752 252 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.5-201ENST00000605253 252 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.12-201ENST00000605291 253 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.8-201ENST00000605353 252 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL670379.7-201ENST00000605823 252 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLN6Q9NWW5 MIR6134-201ENST00000617606 109 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC013470.4-201ENST00000619978 986 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL589994.2-201ENST00000621124 579 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AC244517.12-201ENST00000623581 663 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 AL512643.1-201ENST00000635735 524 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
CLN6Q9NWW5 ZNF29P-201ENST00000225587 168 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 MIR17-201ENST00000385012 84 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 CIR1P3-201ENST00000405137 479 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AC078974.1-201ENST00000411597 223 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 RPS24P7-201ENST00000416921 246 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 PSPHP1-201ENST00000450062 261 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AC126389.1-201ENST00000477436 290 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 UBE2V1P12-201ENST00000503954 474 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 RNU6-572P-201ENST00000516724 80 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 ACA59.2-201ENST00000517061 156 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AC118273.2-201ENST00000532092 465 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AL356432.3-201ENST00000568952 465 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 KC877982.1-201ENST00000602313 470 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AC007938.3-201ENST00000604965 623 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AP001486.3-201ENST00000615334 372 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 Z99571.1-201ENST00000636677 394 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 CDC27P3-201ENST00000635418 1910 ntBASIC1.87□□□□□ -2.11
CLN6Q9NWW5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLN6Q9NWW5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 RNY4P24-201ENST00000362735 96 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 SNORA46.1-201ENST00000391069 153 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 RPS12P24-201ENST00000412619 387 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC006946.1-201ENST00000429106 328 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 UBE2FP3-201ENST00000436366 524 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 RPS15AP9-201ENST00000439856 381 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 USP9YP8-201ENST00000441913 500 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC011005.2-201ENST00000487324 359 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC023194.1-201ENST00000493084 308 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC116655.1-201ENST00000508324 901 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AP003122.3-201ENST00000526316 255 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC084851.1-201ENST00000529105 249 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 SNRPGP18-201ENST00000553000 214 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 DUXAP1-201ENST00000556632 463 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC012213.3-201ENST00000577199 777 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC104763.2-201ENST00000604179 382 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AL355297.2-201ENST00000604792 129 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC034229.4-201ENST00000607861 441 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms