Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
VPS45Q9NRW7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VPS45Q9NRW7 AC007823.1-201ENST00000569932 1566 ntBASIC3.63□□□□□ -1.83
VPS45Q9NRW7 MTND4P14-201ENST00000435799 1354 ntBASIC3.63□□□□□ -1.83
VPS45Q9NRW7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC103710.2-202ENST00000641454 2853 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC110774.1-201ENST00000623567 2018 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RNU6-217P-201ENST00000384164 104 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RNU6-1009P-201ENST00000390996 107 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AL606923.1-201ENST00000406616 190 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC005300.1-201ENST00000428401 373 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AL118520.1-201ENST00000450770 291 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 SNRPFP3-201ENST00000457792 225 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 UBE2DNL-203ENST00000474922 222 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RPL23AP11-201ENST00000475260 469 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AL049830.2-201ENST00000480072 201 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 HMGN1P12-201ENST00000499125 195 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC091885.1-201ENST00000506658 268 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RNU6-875P-201ENST00000516488 106 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 RNU6-711P-201ENST00000517255 106 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS45Q9NRW7 BNIP3P6-201ENST00000549284 499 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC067852.3-201ENST00000589177 561 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC009994.1-201ENST00000606889 253 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AL365204.3-201ENST00000612448 685 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.804-201ENST00000615262 101 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC104985.2-201ENST00000620598 500 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 AC007256.1-201ENST00000392253 2765 ntBASIC3.62□□□□□ -1.83
VPS45Q9NRW7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC058791.1-201ENST00000608412 3198 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 SNORA14A-201ENST00000364773 135 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 RNU2-41P-201ENST00000410991 178 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 HMGB1P27-201ENST00000431429 603 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC092573.2-201ENST00000434546 243 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 MTND3P16-201ENST00000452205 344 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC092798.1-201ENST00000458542 409 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC098591.2-201ENST00000510152 315 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AP006245.1-201ENST00000522549 120 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 RANP3-201ENST00000530970 276 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC100810.6-201ENST00000638068 285 ntBASIC3.61□□□□□ -1.83
VPS45Q9NRW7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS45Q9NRW7 AC068647.1-201ENST00000489539 2265 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU6-797P-201ENST00000363101 109 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.231-201ENST00000364358 102 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU6-767P-201ENST00000384132 107 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 MIR514A2-201ENST00000385131 88 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 MIR514A3-201ENST00000385132 88 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU6-332P-201ENST00000391193 108 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 EI24P2-201ENST00000397776 1076 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU4-46P-201ENST00000410818 138 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC009161.1-201ENST00000417306 376 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RPL7P46-201ENST00000425129 740 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 HMGB3P11-201ENST00000440127 604 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 FABP5P13-201ENST00000452144 328 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU6-953P-201ENST00000459154 107 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU7-180P-201ENST00000459240 63 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RPL37P6-201ENST00000460682 294 ntBASIC3.6□□□□□ -1.83
VPS45Q9NRW7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS45Q9NRW7 RNU6-677P-201ENST00000516914 101 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms