Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR133B-201ENST00000362210 119 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 SNORA22-201ENST00000383907 134 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 RNU6-460P-201ENST00000391158 108 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AL355497.1-201ENST00000406262 551 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 MIR1302-4-201ENST00000408701 150 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 RNA5SP89-201ENST00000410300 108 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AL160275.2-201ENST00000412010 394 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 RPL27AP8-201ENST00000424277 446 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 RPL21P66-201ENST00000426566 466 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC092754.1-201ENST00000472975 479 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 RNU6-703P-201ENST00000516946 107 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 HSPE1P4-201ENST00000550617 308 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC019159.1-201ENST00000605094 187 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC083809.1-201ENST00000615051 472 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 MIR6826-201ENST00000617808 98 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PRDM9Q9NQV7 AC118273.1-201ENST00000525324 3006 ntBASIC5.09□□□□□ -1.6
PRDM9Q9NQV7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.09□□□□□ -1.6
PRDM9Q9NQV7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.09□□□□□ -1.6
PRDM9Q9NQV7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 CUL1P1-201ENST00000509510 2425 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 SMG1P6-201ENST00000532337 2930 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 MIR518D-201ENST00000385014 87 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AL512633.1-201ENST00000399931 655 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 MIR888-201ENST00000401186 77 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 RN7SKP53-201ENST00000411337 315 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AC078809.1-201ENST00000427601 140 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 FTH1P6-201ENST00000430768 320 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AC007969.2-201ENST00000441891 191 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 RNU6-168P-201ENST00000516189 101 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 MIR4489-201ENST00000578869 62 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 MIR5688-201ENST00000580619 83 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 MIR4660-201ENST00000583549 74 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AL356575.1-201ENST00000603008 283 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 IMMP1LP3-201ENST00000604197 224 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AL162431.4-201ENST00000604674 411 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 MIR3914-2-201ENST00000637339 95 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AL034549.2-201ENST00000618285 3373 ntBASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRDM9Q9NQV7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNU6-801P-201ENST00000364087 105 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 Y_RNA.287-201ENST00000364853 94 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNU1-140P-201ENST00000365040 165 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNA5SP339-201ENST00000390987 122 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNA5SP241-201ENST00000391326 114 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AC096649.2-201ENST00000416186 393 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AL138785.1-201ENST00000425821 331 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 MTATP6P7-201ENST00000453315 681 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AL671862.1-201ENST00000515851 349 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNU2-56P-201ENST00000516826 190 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNU6-1183P-201ENST00000517054 60 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 RNU2-12P-201ENST00000517216 168 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AC126177.5-201ENST00000549599 178 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 LINC00933-203ENST00000559812 219 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 MTND5P34-201ENST00000568888 325 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AP000769.2-201ENST00000602344 396 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AC108738.1-201ENST00000603703 237 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AC136601.2-201ENST00000604356 474 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 AL391261.4-201ENST00000616012 481 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 U6.95-201ENST00000636931 70 ntBASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PRDM9Q9NQV7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms