Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
HINT3Q9NQE9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3□□□□□ -1.93
HINT3Q9NQE9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3□□□□□ -1.93
HINT3Q9NQE9 SNORD70.1-201ENST00000391007 85 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AL360271.2-201ENST00000447710 161 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 RPS15AP27-201ENST00000449183 343 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AC010099.1-201ENST00000455434 375 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 snoU13.28-201ENST00000459235 104 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 RN7SL293P-201ENST00000481765 281 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 CCDC34P1-201ENST00000507441 517 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AC104136.1-201ENST00000512969 394 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 SNORA31.1-201ENST00000515993 133 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 SNORA31.5-201ENST00000516190 133 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AC093331.1-201ENST00000521474 169 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AP000867.2-201ENST00000532468 320 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3□□□□□ -1.93
HINT3Q9NQE9 BNIP3P6-201ENST00000549284 499 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3□□□□□ -1.93
HINT3Q9NQE9 MTCO3P24-201ENST00000572729 782 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 MIR3944-201ENST00000581277 108 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AC006557.5-201ENST00000603126 811 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AC024220.1-201ENST00000603675 484 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AC084757.4-201ENST00000616350 526 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AC012314.7-201ENST00000619693 93 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 AC073308.1-201ENST00000623696 305 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3□□□□□ -1.93
HINT3Q9NQE9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3□□□□□ -1.93
HINT3Q9NQE9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HINT3Q9NQE9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HINT3Q9NQE9 MTND4P35-201ENST00000604257 1375 ntBASIC3□□□□□ -1.93
HINT3Q9NQE9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RNU6-884P-201ENST00000363889 107 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RNU4-66P-201ENST00000365199 138 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 SNORA75B-201ENST00000384053 137 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RNU6-45P-201ENST00000384471 107 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RNU6-393P-201ENST00000384475 107 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 MIR591-201ENST00000385290 95 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 SNORA16.2-201ENST00000390991 127 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 MIR888-201ENST00000401186 77 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL592114.1-201ENST00000403842 483 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RN7SKP111-201ENST00000410349 271 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RPL21P90-201ENST00000415692 466 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 HMGN2P20-201ENST00000437531 273 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 PRSS3P4-201ENST00000453323 162 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RBMY2UP-201ENST00000453474 324 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RPL31P58-201ENST00000469001 379 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC034236.1-201ENST00000469891 373 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 RPL21P99-201ENST00000480369 423 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC022493.1-201ENST00000492984 337 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC091885.1-201ENST00000506658 268 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC112206.3-201ENST00000514578 389 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC025755.1-201ENST00000521306 278 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC037471.2-201ENST00000564941 598 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC106782.4-201ENST00000568264 210 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 MIR5692A1-201ENST00000580523 69 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AC007938.3-201ENST00000604965 623 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 AP003400.5-201ENST00000624827 617 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 U2.21-201ENST00000637295 81 ntBASIC2.99□□□□□ -1.93
HINT3Q9NQE9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HINT3Q9NQE9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 MIR148B-201ENST00000362252 99 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 RNU1-70P-201ENST00000362618 164 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 Y_RNA.231-201ENST00000364358 102 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 RNA5SP252-201ENST00000391131 119 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 RNA5SP118-201ENST00000410385 109 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 RNA5SP44-201ENST00000410446 133 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 MYL8P-204ENST00000431574 518 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 HMGB1P31-201ENST00000437242 427 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms