Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC007256.1-201ENST00000392253 2765 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 ZNF285B-201ENST00000561698 1767 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 UBE2L2-201ENST00000254302 429 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 DEFB108F-201ENST00000344638 222 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RNU6-600P-201ENST00000362524 99 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RNU6-393P-201ENST00000384475 107 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RNU6-1011P-201ENST00000384668 107 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RPS4XP7-201ENST00000406274 780 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RNU4-14P-201ENST00000410858 122 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 Z85995.1-201ENST00000415547 335 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RPL27AP8-201ENST00000424277 446 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AL451062.2-201ENST00000427515 271 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC018644.1-201ENST00000429934 551 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RPS29P7-201ENST00000439662 171 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 Y_RNA.632-201ENST00000459189 102 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC117503.1-201ENST00000472241 394 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AP002812.1-201ENST00000495378 474 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 TRBVA-201ENST00000498804 316 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC110768.1-201ENST00000509222 400 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 SNORA19.2-201ENST00000516013 114 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 SNORA70.16-201ENST00000516390 95 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 RN7SKP21-201ENST00000516503 220 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 CBX3P7-201ENST00000532876 502 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 HSPE1P5-201ENST00000561489 272 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 POLR3GP2-201ENST00000588366 668 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC002545.1-201ENST00000592511 181 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC098826.3-201ENST00000603823 466 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 SNORA51-201ENST00000606420 132 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 U2.17-201ENST00000611454 95 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC034102.8-201ENST00000615146 484 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 FAM157A-202ENST00000615155 405 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 uc_338.15-201ENST00000615470 191 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC090132.2-201ENST00000615881 347 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC090574.1-201ENST00000623186 233 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRCC1Q9NPI7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRCC1Q9NPI7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRCC1Q9NPI7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRCC1Q9NPI7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRCC1Q9NPI7 RNA5SP295-201ENST00000362655 121 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RNU6-512P-201ENST00000364438 103 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 Y_RNA.460-201ENST00000384255 102 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 EIF4E2P1-201ENST00000393781 255 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 FAT1P1-201ENST00000406588 507 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 MIR548F5-201ENST00000408421 86 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC016831.2-201ENST00000417179 352 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 BX842559.1-201ENST00000419615 532 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RPL21P66-201ENST00000426566 466 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AL591704.1-201ENST00000432574 275 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 NDUFA5P4-201ENST00000436704 385 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 HMGN1P13-201ENST00000505795 138 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 HMGB3P15-201ENST00000507326 574 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RN7SKP18-201ENST00000516005 275 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RNU6-256P-201ENST00000516747 97 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 Y_RNA.701-201ENST00000516812 110 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 MTCO3P23-201ENST00000561363 289 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 MIR3160-1-201ENST00000577972 85 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC073539.2-201ENST00000597113 165 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AL133255.1-201ENST00000606374 441 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AL022345.1-201ENST00000607292 135 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 RNA5SP196-201ENST00000625967 102 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 Z99571.1-201ENST00000636677 394 ntBASIC3.15□□□□□ -1.91
KRCC1Q9NPI7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms