Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SCARNA14-201ENST00000516903 136 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 Y_RNA.718-201ENST00000517110 102 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 ZNF807-201ENST00000328088 1707 ntBASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC113Q9H0I3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 SNORD14B-201ENST00000364533 90 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RNU6-593P-201ENST00000364716 112 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RNU6-384P-201ENST00000364900 104 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RNU6-1329P-201ENST00000365664 107 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MIR199A2-201ENST00000385289 110 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RPS4XP3-201ENST00000398541 413 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AL445529.1-201ENST00000398713 389 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MIR1302-11-201ENST00000408051 138 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MIR1302-9-201ENST00000408365 138 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MIR1302-10-201ENST00000408734 138 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 CYCSP19-201ENST00000411715 316 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 HMGN2P30-201ENST00000423237 256 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RPL7P37-201ENST00000425095 738 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MTCO2P12-201ENST00000427426 682 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RPL7P2-201ENST00000427639 268 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC104576.1-201ENST00000524225 88 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AP005597.4-201ENST00000526762 229 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 CBX3P7-201ENST00000532876 502 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MIR5685-201ENST00000579080 79 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC020914.4-201ENST00000597690 277 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC244505.7-201ENST00000599675 272 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC007938.3-201ENST00000604965 623 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 MIR1302-2-201ENST00000607096 138 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 PISRT1.1-201ENST00000616930 107 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC007742.2-201ENST00000618226 398 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 AC066616.2-201ENST00000559334 1481 ntBASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC113Q9H0I3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 FRG1CP-201ENST00000358464 769 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-37P-201ENST00000362692 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-11P-201ENST00000364234 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-7-201ENST00000364784 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-8-201ENST00000365467 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-25P-201ENST00000383873 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-1-201ENST00000383898 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-48P-201ENST00000384161 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-36P-201ENST00000384172 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-4P-201ENST00000384205 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-5P-201ENST00000384238 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-3P-201ENST00000384314 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-166P-201ENST00000384371 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-16P-201ENST00000384385 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-15P-201ENST00000384534 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-658P-201ENST00000384606 106 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-2-201ENST00000384627 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-29P-201ENST00000384637 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 SNORA1.3-201ENST00000384676 136 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-95P-201ENST00000384697 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-9-201ENST00000384776 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU6-33P-201ENST00000384793 107 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 SNORD73A-201ENST00000386062 65 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 SKA2P1-201ENST00000425592 390 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC087650.1-201ENST00000431445 468 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC011742.1-201ENST00000431448 434 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AL645568.3-201ENST00000433683 316 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC007389.2-201ENST00000434630 306 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 SNRPEP4-201ENST00000435815 279 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 HMGB3P8-201ENST00000449709 577 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RN7SL323P-201ENST00000494712 295 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC006445.2-201ENST00000510061 472 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 RNU1-103P-201ENST00000516502 125 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 AC087499.8-201ENST00000578406 226 ntBASIC4.27□□□□□ -1.73
CCDC113Q9H0I3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms