Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 DEFB108F-201ENST00000344638 222 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.48-201ENST00000362710 103 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 RNY3P11-201ENST00000364153 102 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.288-201ENST00000364854 92 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.380-201ENST00000365663 111 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 RNU6-209P-201ENST00000384118 107 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.461-201ENST00000384263 103 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 SNORA41-201ENST00000384675 132 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 SNORD73A-201ENST00000386062 65 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 RPS29P7-201ENST00000439662 171 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 RPS23P3-201ENST00000470993 430 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AC022447.4-201ENST00000504053 364 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AC022616.4-201ENST00000522985 181 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AP000889.1-201ENST00000530968 660 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 RPL23AP87-202ENST00000573039 466 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
RNF38Q9H0F5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU5A-1-201ENST00000362698 116 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU6-472P-201ENST00000384299 107 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU6-14P-201ENST00000384630 106 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.552-201ENST00000384665 112 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 HSPE1P8-201ENST00000406997 288 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU4-61P-201ENST00000411243 107 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 BX276092.3-201ENST00000424182 230 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 CHEK2P4-201ENST00000450340 246 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU7-138P-201ENST00000459479 64 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 HSPE1P6-201ENST00000479457 291 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU6-352P-201ENST00000516908 107 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.715-201ENST00000517082 110 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 IGLV3-26-201ENST00000520756 302 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 MIR5684-201ENST00000585074 65 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AL606490.9-201ENST00000603331 271 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 RNU6-85P-201ENST00000605989 107 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 MIR6868-201ENST00000611215 58 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 SDR42E1P2-201ENST00000614861 481 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 MIR6500-201ENST00000622700 86 ntBASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF38Q9H0F5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.222-201ENST00000364264 102 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 SNORD14.1-201ENST00000365609 90 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 SNORA36C-201ENST00000384289 132 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AL590704.1-201ENST00000402856 794 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 MIR1252-201ENST00000408861 65 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 RNU2-71P-201ENST00000411395 189 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 RPL21P90-201ENST00000415692 466 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 SYF2P2-201ENST00000417620 583 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 UBE2V1P4-201ENST00000425374 344 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AL691449.1-201ENST00000426570 421 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 RPL7P2-201ENST00000427639 268 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC011816.1-201ENST00000441346 546 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AL031274.1-201ENST00000450334 232 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 PPBPP1-201ENST00000510807 373 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 RNU6-408P-201ENST00000515910 100 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 RNU2-53P-201ENST00000516257 147 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC023157.2-201ENST00000540596 141 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 MIR3690-201ENST00000580266 75 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC125232.2-201ENST00000592457 143 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC016727.2-201ENST00000603988 621 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 MTND4LP5-201ENST00000605152 292 ntBASIC4.23□□□□□ -1.73
RNF38Q9H0F5 AC006023.2-201ENST00000609916 167 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms