Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ARF4P2-201ENST00000430209 526 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC025750.2-201ENST00000442609 450 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 MTCO3P38-201ENST00000468910 766 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 RNA5SP401-201ENST00000515920 127 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 RNA5SP165-201ENST00000517142 115 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 MTND4P7-201ENST00000523876 130 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AP003122.3-201ENST00000526316 255 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC084851.1-201ENST00000529105 249 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 RPL12P50-201ENST00000603116 116 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC006023.1-201ENST00000603944 259 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AC004805.2-201ENST00000605382 482 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 FTX_3.1-201ENST00000610451 147 ntBASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.97□□□□□ -1.77
RTFDC1Q9BY42 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RTFDC1Q9BY42 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 Y_RNA.256-201ENST00000364594 104 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 RNU6-534P-201ENST00000364877 106 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 Y_RNA.381-201ENST00000365666 102 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 HMGN2P30-201ENST00000423237 256 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AL139415.2-201ENST00000431968 163 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 RPL37P4-201ENST00000448908 268 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 CECR9-201ENST00000453421 199 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 RN7SL429P-201ENST00000479090 223 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC012181.1-201ENST00000479895 423 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC092989.1-201ENST00000481235 277 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 RN7SL489P-201ENST00000486185 223 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 RN7SL327P-201ENST00000488659 223 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 SNORA31.1-201ENST00000515993 133 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 SNORA31.5-201ENST00000516190 133 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 NARSP2-201ENST00000518524 679 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC092325.1-201ENST00000566449 554 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC015917.1-201ENST00000579654 510 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 MIR4801-201ENST00000582704 82 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AC002553.4-201ENST00000616896 331 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 RN7SL853P-201ENST00000617250 223 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 AL353746.1-201ENST00000566293 6881 ntBASIC3.96□□□□□ -1.78
RTFDC1Q9BY42 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 RNA5SP229-201ENST00000410809 99 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 RPL26P27-201ENST00000414397 437 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 GTF2IP20-201ENST00000431663 360 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 HMGB3P8-201ENST00000449709 577 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AL118520.1-201ENST00000450770 291 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 MIR3186-201ENST00000577404 85 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 uc_338.34-201ENST00000617467 174 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 U6.42-201ENST00000618440 107 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 SNORD39.4-201ENST00000620099 78 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AL137790.1-201ENST00000634283 177 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 RIOK3P1-201ENST00000418778 1528 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 AL354685.2-201ENST00000448218 1447 ntBASIC3.95□□□□□ -1.78
RTFDC1Q9BY42 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 MTND5P7-201ENST00000413558 1798 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC017071.1-201ENST00000564407 2204 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AC091152.2-201ENST00000591628 2569 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 FTLP6-201ENST00000355274 422 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 SNORA54-201ENST00000384281 123 ntBASIC3.94□□□□□ -1.78
RTFDC1Q9BY42 RNU6-434P-201ENST00000384376 107 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms