Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 MIR302D-201ENST00000362275 68 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RNU1-58P-201ENST00000362413 163 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 SNORD14B-201ENST00000364533 90 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RNU6-1222P-201ENST00000384615 107 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 MIR1302-8-201ENST00000408342 128 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RN7SKP223-201ENST00000410582 62 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RN7SKP284-201ENST00000411002 343 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 UBE2V1P11-201ENST00000411559 285 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 MTCYBP38-201ENST00000417160 1123 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 BTF3P4-201ENST00000418852 495 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC013828.1-201ENST00000481845 158 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AL160314.1-201ENST00000490836 438 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RNU7-40P-201ENST00000516397 64 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 RNU6-250P-201ENST00000516958 103 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 PSMA3P-201ENST00000555485 635 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC012414.2-201ENST00000559474 187 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC012213.3-201ENST00000577199 777 ntBASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS25Q9BRG1 HAUS6P2-201ENST00000433254 2404 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 SNORD14D-201ENST00000384390 87 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AL592310.1-201ENST00000414330 671 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 BTF3L4P3-201ENST00000418879 476 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AL451054.2-201ENST00000420896 202 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 PRPS1P1-201ENST00000445305 876 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 MTND3P4-201ENST00000453537 303 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AMD1P1-201ENST00000457220 922 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC109927.2-201ENST00000506416 303 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC008837.1-201ENST00000511513 412 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 RNA5SP290-201ENST00000517133 127 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AL078604.3-201ENST00000615580 211 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 RMST_10.1-201ENST00000616309 154 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC009032.1-201ENST00000617574 431 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 AC017037.3-201ENST00000625016 472 ntBASIC0.81□□□□□ -2.28
VPS25Q9BRG1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
VPS25Q9BRG1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 U8.1-201ENST00000362843 134 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 RNU1-22P-201ENST00000363334 158 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 MIR513A1-201ENST00000385138 129 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AL133264.1-201ENST00000407157 562 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 RNU6-1140P-201ENST00000410517 106 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 RNU2-48P-201ENST00000410694 191 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AL591704.2-201ENST00000421658 181 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 MTND4P24-201ENST00000424002 397 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AC139712.2-201ENST00000424302 339 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AL451062.2-201ENST00000427515 271 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 MTND5P25-201ENST00000430499 799 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 ZNF965P-201ENST00000432501 817 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AL441985.1-201ENST00000457727 251 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 RPL21P47-201ENST00000483696 477 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AP001025.1-201ENST00000486139 332 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 RNA5SP135-201ENST00000517019 125 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 ADAM3B-201ENST00000569937 840 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 SNORA77B-201ENST00000578179 125 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AC133794.1-201ENST00000602731 914 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 AC079416.3-201ENST00000624479 549 ntBASIC0.8□□□□□ -2.28
VPS25Q9BRG1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS25Q9BRG1 MTCO1P9-201ENST00000505577 1534 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AC092125.1-201ENST00000562568 1995 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AL138713.1-201ENST00000624026 2130 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms