Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.51□□□□□ -2.01
LITAFQ99732 SUMO2P15-201ENST00000604285 278 ntBASIC2.51□□□□□ -2.01
LITAFQ99732 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.51□□□□□ -2.01
LITAFQ99732 AC019193.3-201ENST00000609144 554 ntBASIC2.51□□□□□ -2.01
LITAFQ99732 AL161616.1-201ENST00000611867 286 ntBASIC2.51□□□□□ -2.01
LITAFQ99732 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.51□□□□□ -2.01
LITAFQ99732 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LITAFQ99732 AC099506.2-201ENST00000623074 221 ntBASIC2.51□□□□□ -2.01
LITAFQ99732 AC092608.2-201ENST00000624427 218 ntBASIC2.51□□□□□ -2.01
LITAFQ99732 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.51□□□□□ -2.01
LITAFQ99732 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LITAFQ99732 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.51□□□□□ -2.01
LITAFQ99732 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LITAFQ99732 AC066616.2-201ENST00000559334 1481 ntBASIC2.51□□□□□ -2.01
LITAFQ99732 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.51□□□□□ -2.01
LITAFQ99732 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LITAFQ99732 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.51□□□□□ -2.01
LITAFQ99732 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.51□□□□□ -2.01
LITAFQ99732 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LITAFQ99732 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LITAFQ99732 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LITAFQ99732 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 PWAR6-201ENST00000552334 4618 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-37P-201ENST00000362692 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 Y_RNA.112-201ENST00000363250 102 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-11P-201ENST00000364234 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-7-201ENST00000364784 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 SNORA33.2-201ENST00000365413 134 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-8-201ENST00000365467 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-805P-201ENST00000365643 106 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-25P-201ENST00000383873 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 SNORA22B-201ENST00000383876 138 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-1-201ENST00000383898 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-890P-201ENST00000384121 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-48P-201ENST00000384161 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-36P-201ENST00000384172 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-4P-201ENST00000384205 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-5P-201ENST00000384238 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-3P-201ENST00000384314 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-166P-201ENST00000384371 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-16P-201ENST00000384385 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-15P-201ENST00000384534 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-140P-201ENST00000384566 108 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-2-201ENST00000384627 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-29P-201ENST00000384637 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-9-201ENST00000384776 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-33P-201ENST00000384793 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 MIR517A-201ENST00000385001 87 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-308P-201ENST00000390957 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AL109941.1-201ENST00000401925 229 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 PPIAP31-201ENST00000405422 495 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 YPEL5P1-201ENST00000419731 367 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RPL17P36-201ENST00000420302 549 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 PGBD4P6-201ENST00000421501 610 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 CHEK2P5-201ENST00000423877 246 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AC097713.2-201ENST00000430199 356 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AC092573.2-201ENST00000434546 243 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.5□□□□□ -2.01
LITAFQ99732 AL391987.1-201ENST00000441025 200 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.5□□□□□ -2.01
LITAFQ99732 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.5□□□□□ -2.01
LITAFQ99732 ANP32BP2-201ENST00000454525 545 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 MIR2053-201ENST00000459295 91 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RPS4XP22-201ENST00000480755 780 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RPL7P51-201ENST00000490532 749 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-1045P-201ENST00000516321 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-572P-201ENST00000516724 80 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LITAFQ99732 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.5□□□□□ -2.01
LITAFQ99732 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.5□□□□□ -2.01
LITAFQ99732 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.5□□□□□ -2.01
LITAFQ99732 AC007225.2-201ENST00000562529 256 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.5□□□□□ -2.01
LITAFQ99732 AC006504.6-201ENST00000590142 199 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AC011494.1-201ENST00000596454 237 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AC068790.4-201ENST00000602474 263 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 AL160281.1-201ENST00000605307 311 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 RNU6-6P-201ENST00000606623 107 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 MIR6778-201ENST00000617912 73 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 Z69720.2-201ENST00000624755 279 ntBASIC2.5□□□□□ -2.01
LITAFQ99732 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
LITAFQ99732 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
LITAFQ99732 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.5□□□□□ -2.01
LITAFQ99732 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.49□□□□□ -2.01
LITAFQ99732 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.49□□□□□ -2.01
LITAFQ99732 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.49□□□□□ -2.01
LITAFQ99732 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LITAFQ99732 ZNF826P-207ENST00000622273 1910 ntBASIC2.49□□□□□ -2.01
LITAFQ99732 RNU6-1115P-201ENST00000362490 106 ntBASIC2.49□□□□□ -2.01
LITAFQ99732 RNA5SP507-201ENST00000363603 121 ntBASIC2.49□□□□□ -2.01
LITAFQ99732 RNU6-1059P-201ENST00000363752 98 ntBASIC2.49□□□□□ -2.01
LITAFQ99732 RNU1-132P-201ENST00000364300 164 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms