Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 CBX3P3-201ENST00000508108 532 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.37□□□□□ -2.35
COL12A1Q99715 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.37□□□□□ -2.35
COL12A1Q99715 FAM60BP-201ENST00000578364 658 ntBASIC0.37□□□□□ -2.35
COL12A1Q99715 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
COL12A1Q99715 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
COL12A1Q99715 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
COL12A1Q99715 Y_RNA.65-201ENST00000362846 100 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 SNORD118-201ENST00000363593 134 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 RNU6-1187P-201ENST00000364771 110 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.36□□□□□ -2.35
COL12A1Q99715 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.36□□□□□ -2.35
COL12A1Q99715 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.36□□□□□ -2.35
COL12A1Q99715 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 MIR3616-201ENST00000584070 92 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 RSL24D1P11-201ENST00000591045 491 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 DUXAP10-204ENST00000612052 616 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 AL138880.2-201ENST00000616214 239 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
COL12A1Q99715 MIR92A1-201ENST00000385233 78 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 RNU6-920P-201ENST00000410926 92 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 RNU6-193P-201ENST00000410977 107 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.36□□□□□ -2.35
COL12A1Q99715 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.36□□□□□ -2.35
COL12A1Q99715 PRELID3BP1-201ENST00000457142 540 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 VN1R81P-201ENST00000602085 372 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
COL12A1Q99715 RNY4P7-201ENST00000364600 96 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 RNU6-923P-201ENST00000364753 107 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 HMGB1P17-201ENST00000403495 628 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 TRGV6-201ENST00000417928 299 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 AC004383.1-201ENST00000438135 289 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 RNF2P1-201ENST00000442955 1010 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 SNORD124-201ENST00000459577 104 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.36□□□□□ -2.35
COL12A1Q99715 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.36□□□□□ -2.35
COL12A1Q99715 AC083865.1-201ENST00000636634 831 ntBASIC0.36□□□□□ -2.35
COL12A1Q99715 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.35□□□□□ -2.35
COL12A1Q99715 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.35□□□□□ -2.35
COL12A1Q99715 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.35□□□□□ -2.35
COL12A1Q99715 RNU6-1004P-201ENST00000516584 111 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 MIR3198-2-201ENST00000577868 80 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 CLIC4P2-201ENST00000601934 717 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 AC025165.5-201ENST00000602802 578 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
COL12A1Q99715 Y_RNA.52-201ENST00000362760 96 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 SNORA25.8-201ENST00000364831 128 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 RNU6-939P-201ENST00000384634 107 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
COL12A1Q99715 RNU6-1218P-201ENST00000458990 108 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 SNORA31.18-201ENST00000517043 134 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 PRR13P7-201ENST00000605538 430 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 MIR7515-201ENST00000637837 67 ntBASIC0.35□□□□□ -2.35
COL12A1Q99715 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
COL12A1Q99715 RNY3P5-201ENST00000384127 102 ntBASIC0.34□□□□□ -2.35
COL12A1Q99715 Y_RNA.583-201ENST00000391033 113 ntBASIC0.34□□□□□ -2.35
COL12A1Q99715 RN7SKP158-201ENST00000410453 326 ntBASIC0.34□□□□□ -2.35
COL12A1Q99715 AC245047.4-201ENST00000433189 144 ntBASIC0.34□□□□□ -2.35
COL12A1Q99715 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.34□□□□□ -2.35
COL12A1Q99715 UBL5P1-201ENST00000507979 193 ntBASIC0.34□□□□□ -2.35
COL12A1Q99715 AC108120.2-201ENST00000512973 294 ntBASIC0.34□□□□□ -2.35
COL12A1Q99715 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.34□□□□□ -2.35
COL12A1Q99715 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.34□□□□□ -2.35
COL12A1Q99715 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
COL12A1Q99715 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.34□□□□□ -2.36
COL12A1Q99715 HMGB1P38-201ENST00000490557 577 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.34□□□□□ -2.36
COL12A1Q99715 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.34□□□□□ -2.36
COL12A1Q99715 AC008945.2-201ENST00000606056 604 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 AC104763.3-201ENST00000613765 618 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 AP003476.1-201ENST00000623984 516 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 ZNF29P-201ENST00000225587 168 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 Y_RNA.375-201ENST00000365625 101 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 MIR32-201ENST00000384965 70 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 MIR938-201ENST00000401216 83 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 AL356131.1-201ENST00000405826 414 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 RPL7P30-201ENST00000420888 709 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 RNU6-782P-201ENST00000516852 104 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 AC022690.1-201ENST00000526681 550 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 LSM6P2-201ENST00000552208 177 ntBASIC0.34□□□□□ -2.36
COL12A1Q99715 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.34□□□□□ -2.36
COL12A1Q99715 Y_RNA.228-201ENST00000364346 98 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
COL12A1Q99715 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 AL513475.1-201ENST00000406602 315 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 VN1R36P-201ENST00000414936 291 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.33□□□□□ -2.36
COL12A1Q99715 NDUFB4P2-201ENST00000509515 391 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 SNORA14.1-201ENST00000516113 141 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 SNORD14A-201ENST00000606526 91 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 LINC02211-204ENST00000642024 1070 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL12A1Q99715 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL12A1Q99715 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL12A1Q99715 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
COL12A1Q99715 RNA5SP252-201ENST00000391131 119 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 OR9R1P-201ENST00000412200 877 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 TMEM167AP1-201ENST00000423409 219 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms