Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RAB9AP5-201ENST00000437794 597 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AL353689.1-201ENST00000438895 199 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 RAB9AP2-201ENST00000443911 597 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 HMGN2P18-201ENST00000450680 270 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AC008571.1-201ENST00000467232 300 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
HMCN1Q96RW7 RNU6-863P-201ENST00000515989 104 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AC022616.2-201ENST00000523185 300 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AP002963.1-201ENST00000530590 184 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 CYCSP30-201ENST00000546447 172 ntBASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.29□□□□□ -2.2
HMCN1Q96RW7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.29□□□□□ -2.2
HMCN1Q96RW7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-879P-201ENST00000364328 108 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU4-24P-201ENST00000364565 139 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-639P-201ENST00000384074 107 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.497-201ENST00000384447 98 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-376P-201ENST00000384731 106 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-440P-201ENST00000390882 105 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 CYCSP53-201ENST00000455540 265 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-871P-201ENST00000516122 100 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-1143P-201ENST00000516125 104 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AP002001.1-203ENST00000534002 267 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 MIR3938-201ENST00000582157 103 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC244505.7-201ENST00000599675 272 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC005156.1-201ENST00000613371 573 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.17-201ENST00000362433 111 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-270P-201ENST00000364131 105 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-1326P-201ENST00000391262 107 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 TXNP7-201ENST00000406296 293 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.605-201ENST00000410577 105 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 MTND3P17-201ENST00000416968 344 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL139247.1-201ENST00000422768 325 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RPS27AP17-201ENST00000463344 455 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 PRPF19P1-201ENST00000584766 898 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 SNRPGP15-201ENST00000600149 222 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 DUXAP4-201ENST00000603046 613 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-545P-201ENST00000362681 104 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-512P-201ENST00000364438 103 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-945P-201ENST00000383947 107 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-480P-201ENST00000384332 107 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-393P-201ENST00000384475 107 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-1009P-201ENST00000390996 107 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 SNORA53-201ENST00000391141 249 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC010881.1-201ENST00000433830 235 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC093278.1-201ENST00000494700 600 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RPL30P11-201ENST00000495304 339 ntBASIC1.28□□□□□ -2.2
HMCN1Q96RW7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.28□□□□□ -2.2
HMCN1Q96RW7 RNU6-470P-201ENST00000515954 104 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms