Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNU6-143P-201ENST00000516942 93 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 RNA5SP471-201ENST00000516971 106 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AP004242.1-201ENST00000533701 349 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 APOOP3-201ENST00000536787 586 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 MTCO3P23-201ENST00000561363 289 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC007151.1-201ENST00000572774 483 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC098826.3-201ENST00000603823 466 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC106900.2-201ENST00000604994 317 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC107294.1-201ENST00000609524 467 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 AL138726.1-201ENST00000614873 333 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX18Q96RF0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNX18Q96RF0 ZNF285B-201ENST00000561698 1767 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNX18Q96RF0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNX18Q96RF0 AP001148.1-201ENST00000624124 2359 ntBASIC3.45□□□□□ -1.86
SNX18Q96RF0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 AF127577.6-201ENST00000623352 2191 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 MIR369-201ENST00000362155 70 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 Y_RNA.162-201ENST00000363683 102 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 MTCYBP4-201ENST00000401524 249 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 RPL21P90-201ENST00000415692 466 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 RPL7P10-201ENST00000417407 739 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 AL592045.1-201ENST00000429867 352 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 HSPD1P21-201ENST00000436541 245 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 FABP5P14-201ENST00000437273 393 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 RPL32P28-201ENST00000443577 397 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 MTND1P17-201ENST00000448961 204 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 RPS27P29-201ENST00000463110 252 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 AC091153.1-201ENST00000466297 402 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 SNRPGP3-201ENST00000469405 227 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 RPL7P5-201ENST00000471472 736 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 UBE2CP3-201ENST00000502715 450 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 RNU6-323P-201ENST00000521915 107 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 AC004024.1-201ENST00000549244 247 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 AC020661.2-201ENST00000560114 134 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 AC080078.3-201ENST00000605407 463 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 PART1_1.1-201ENST00000611761 217 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 AL355365.1-201ENST00000616480 294 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX18Q96RF0 AL512643.1-201ENST00000635735 524 ntBASIC3.44□□□□□ -1.86
SNX18Q96RF0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX18Q96RF0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX18Q96RF0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX18Q96RF0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX18Q96RF0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX18Q96RF0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 RNU6-371P-201ENST00000364283 108 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 RNA5SP97-201ENST00000365006 84 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 SNORA4.3-201ENST00000365564 137 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 SKA2P1-201ENST00000425592 390 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC007919.1-201ENST00000429380 217 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC008264.1-201ENST00000447612 367 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 RPS20P22-201ENST00000473700 357 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 HMGB3P15-201ENST00000507326 574 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC005741.1-201ENST00000511094 432 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 RNU6-1332P-201ENST00000516666 104 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 OR5D17P-201ENST00000531492 978 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC011602.1-201ENST00000546484 331 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 BNIP3P22-201ENST00000593399 556 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC073539.2-201ENST00000597113 165 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC124303.1-201ENST00000605703 360 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC090132.2-201ENST00000615881 347 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 AC006133.1-201ENST00000617106 264 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX18Q96RF0 Z99571.1-201ENST00000636677 394 ntBASIC3.43□□□□□ -1.86
SNX18Q96RF0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms