Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.39□□□□□ -2.35
SPG11Q96JI7 RSL24D1P8-201ENST00000434442 492 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 RNF2P1-201ENST00000442955 1010 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 CABYRP1-201ENST00000465493 1045 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 AC055731.1-201ENST00000474387 401 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 AC118282.2-201ENST00000508739 374 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 SNORA31.13-201ENST00000516624 135 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.39□□□□□ -2.35
SPG11Q96JI7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.39□□□□□ -2.35
SPG11Q96JI7 AL355816.1-201ENST00000607951 118 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SPG11Q96JI7 AC004241.3-201ENST00000611728 517 ntBASIC0.39□□□□□ -2.35
SPG11Q96JI7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
SPG11Q96JI7 RNU6-1184P-201ENST00000384588 108 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 MIR493-201ENST00000385254 89 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 AL589994.1-201ENST00000404962 340 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 AC004383.1-201ENST00000438135 289 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 SSXP4-201ENST00000451349 245 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 CIR1P1-201ENST00000524055 1133 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 MIR4287-201ENST00000579398 78 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 AC083865.1-201ENST00000636634 831 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 MIR601-201ENST00000385256 79 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 MTCO3P4-201ENST00000419236 787 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 SFR1P2-201ENST00000421841 730 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.38□□□□□ -2.35
SPG11Q96JI7 RN7SKP5-201ENST00000517045 272 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 AC073111.2-201ENST00000605657 1075 ntBASIC0.38□□□□□ -2.35
SPG11Q96JI7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SPG11Q96JI7 UBE2FP1-201ENST00000416536 447 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC087588.1-201ENST00000462203 316 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC134050.1-201ENST00000495088 933 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 RNU6-1073P-201ENST00000517182 106 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC004817.2-201ENST00000561794 651 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AP003476.1-201ENST00000623984 516 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 RNY3P5-201ENST00000384127 102 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 RNU1-119P-201ENST00000391122 165 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 VN1R36P-201ENST00000414936 291 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AL606495.1-201ENST00000422100 813 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 HSPE1P21-201ENST00000438283 308 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 RPL39P28-201ENST00000465655 155 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPG11Q96JI7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 AC004812.1-201ENST00000540773 146 ntBASIC0.37□□□□□ -2.35
SPG11Q96JI7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.37□□□□□ -2.35
SPG11Q96JI7 MIR101-1-201ENST00000362265 75 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 FAM206BP-201ENST00000510179 541 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC112206.3-201ENST00000514578 389 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 Y_RNA.659-201ENST00000515994 113 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 MIR5190-201ENST00000581537 80 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC078899.2-201ENST00000595282 212 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC007792.1-201ENST00000623023 402 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AL356585.4-201ENST00000623078 1229 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SPG11Q96JI7 ZNF29P-201ENST00000225587 168 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AP002784.2-201ENST00000397300 549 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 RPL21P66-201ENST00000426566 466 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 RSU1P2-202ENST00000437884 485 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.36□□□□□ -2.35
SPG11Q96JI7 AC108120.2-201ENST00000512973 294 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 RNU6-491P-201ENST00000516099 110 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 RNU6-362P-201ENST00000516736 90 ntBASIC0.36□□□□□ -2.35
SPG11Q96JI7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SPG11Q96JI7 RNU6-600P-201ENST00000362524 99 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.35□□□□□ -2.35
SPG11Q96JI7 AL356320.2-201ENST00000417263 507 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 PDCL2P1-201ENST00000419302 352 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.35□□□□□ -2.35
SPG11Q96JI7 AL513343.1-201ENST00000451818 792 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.35□□□□□ -2.35
SPG11Q96JI7 SNORD124-201ENST00000459577 104 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.35□□□□□ -2.35
SPG11Q96JI7 HSBP1P1-201ENST00000555205 166 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.35□□□□□ -2.35
SPG11Q96JI7 MIR3198-2-201ENST00000577868 80 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.35□□□□□ -2.35
SPG11Q96JI7 AC016925.2-201ENST00000605108 242 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 AC034236.3-201ENST00000605999 461 ntBASIC0.35□□□□□ -2.35
SPG11Q96JI7 SNORD14A-201ENST00000606526 91 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms