Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 FAM92A1P2-202ENST00000504766 877 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 SMURF2P1-201ENST00000514992 481 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 SNORA25.11-201ENST00000515935 105 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 SCARNA13-201ENST00000516672 275 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 AP003181.2-201ENST00000528941 181 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 AP003122.4-201ENST00000530980 758 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC121758.2-201ENST00000553271 193 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC009878.1-201ENST00000621819 340 ntBASIC2.68□□□□□ -1.98
VMP1Q96GC9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
VMP1Q96GC9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VMP1Q96GC9 RNU1-35P-201ENST00000362782 153 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 RNU2-63P-201ENST00000410792 194 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AL353621.1-201ENST00000418219 243 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC011233.1-201ENST00000422812 283 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 IPO7P1-201ENST00000442031 636 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 ZNF114P1-201ENST00000453500 292 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 KLF3P2-201ENST00000465138 268 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 MTCO2P29-201ENST00000465212 189 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC018437.1-201ENST00000492214 406 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AF213884.2-201ENST00000510417 903 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC118465.1-201ENST00000513820 1271 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 RNU5B-3P-201ENST00000516601 115 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 IGLV3-17-201ENST00000519099 244 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.67□□□□□ -1.98
VMP1Q96GC9 AL670379.10-201ENST00000604330 253 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AL670379.9-201ENST00000605428 253 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 MIR7106-201ENST00000612419 65 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC011890.2-201ENST00000613393 294 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AL359547.2-201ENST00000615810 418 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 AC092140.2-201ENST00000618027 521 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 HSPA8P4-201ENST00000511877 1920 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
VMP1Q96GC9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VMP1Q96GC9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VMP1Q96GC9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VMP1Q96GC9 RNU1-100P-201ENST00000365255 165 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 SNORA6-201ENST00000384033 151 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 MIR144-201ENST00000384886 86 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 NPM1P11-201ENST00000417106 855 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AL353706.1-201ENST00000436728 494 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AL135938.1-201ENST00000443141 297 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC112771.1-201ENST00000463581 102 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 MTND4P2-201ENST00000507767 1203 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC008526.1-201ENST00000509149 338 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 TBCAP3-201ENST00000512475 312 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 CBX3P7-201ENST00000532876 502 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC079598.5-201ENST00000547460 117 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AL356575.1-201ENST00000603008 283 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AL138963.2-201ENST00000605137 226 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 RNU6-91P-201ENST00000607774 107 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 MIR5739-201ENST00000619803 80 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AC024940.5-201ENST00000622889 474 ntBASIC2.66□□□□□ -1.98
VMP1Q96GC9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
VMP1Q96GC9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VMP1Q96GC9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VMP1Q96GC9 SNORA80A-201ENST00000363922 136 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 SNORA3A-201ENST00000364113 130 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 RNU5E-5P-201ENST00000365379 116 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 MIR181A2-201ENST00000384863 110 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VMP1Q96GC9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VMP1Q96GC9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VMP1Q96GC9 RN7SKP158-201ENST00000410453 326 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC025750.2-201ENST00000442609 450 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.65□□□□□ -1.99
VMP1Q96GC9 AP000797.1-201ENST00000478870 387 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 CKS1BP2-201ENST00000497342 240 ntBASIC2.65□□□□□ -1.99
VMP1Q96GC9 AC117522.3-201ENST00000507974 584 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms